| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4218 |
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| Symbol | rpsD |
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| ID | 3961936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4693331 |
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| End bp | 4693954 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637919032 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_525436 |
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| Protein GI | 89902965 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCACGTT ATCTCGGCCC CAAGGCCAAA TTATCCCGCC GTGAAGGCAC TGACCTGTTT
TTAAAGAGCG CACGTCGTTC AATTGGAGAC AAGGCTAAAT TTGACTCTAA ACCAGGTCAA
CACGGGCGCA CGTCGGGCGC ACGTACATCC GACTTTGGCC TGCAACTTCG TGAGAAGCAA
AAGGTCAAGC GTATGTATGG GGTTCTGGAG AAGCAGTTTC GTCGTTATTT CGAAGAGGCC
GATCGCCGCA AAGGCAACAC GGGGGCTAAC CTGTTGTCTC TTTTGGAATC TCGTCTTGAC
AATGTTGTGT ACCGGATGGG CTTTGGCTCA ACCCGTGCTG AAGCACGTCA GCTTGTTTCT
CACAAAGCCA TGACCGTTAA CGGAAAAAGT GTCAACATTC CGTCATACAT GGTTAAAGCG
GGCGATATGA TCGCTGTTCG CGACAAGTCG AAGAAGCAGA ATCGTATTGT GGAGGCGCTG
CAACTGGCTC AGCAGGTCGG TATGCCGGCT TGGGTTGAGA TTAACGCTGA AAAAGCTGAA
GGCACATTTA AGGCTGTTCC TGATCGCGAT CAGTTTGCCG CTGATGTCAA CGAATCACTG
ATTGTTGAGT TGTATTCGCG TTAA
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| Protein sequence | MARYLGPKAK LSRREGTDLF LKSARRSIGD KAKFDSKPGQ HGRTSGARTS DFGLQLREKQ
KVKRMYGVLE KQFRRYFEEA DRRKGNTGAN LLSLLESRLD NVVYRMGFGS TRAEARQLVS
HKAMTVNGKS VNIPSYMVKA GDMIAVRDKS KKQNRIVEAL QLAQQVGMPA WVEINAEKAE
GTFKAVPDRD QFAADVNESL IVELYSR
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