| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4204 |
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| Symbol | |
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| ID | 3961921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4674891 |
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| End bp | 4676492 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637919017 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_525422 |
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| Protein GI | 89902951 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACTC TTACTGAAAA TATTCTGGCC AACCTGATCG CCAACCGTGC AGCAGAGATG
CCGGACTTCG ATGTCCTCAC CATCGAAGGT GCTGGCGTCT GCCCTGATGA GGTGCGCAAC
TACCGAGACC TTTGGGACAA TGGTCGTCGC ATGGCGCAAG TATTGCTGGA TTTGGGAGTG
CAGCCAGGCC ACCGCTTCGC ATTGCTTATG GCCAACCACG CCGAGTTTGT GGAGGCGATG
GTCGCGGCAA GTATCGTGGG TGCGGTAGTG GTGCCAATTG ACCCACGAGC CAAAGGCGAC
AAGCTGCATT TCATGTTGGA AAACGCCCAG TGCAGCGGTG CCTTCGTGGC GGACTATGCA
CTAGGCAATT TGCAGCCATT GCGTGTCACG CTACCCGGTC TGCGCTGGGT CATGGGCTTT
GCGACCAATG AGGGCACGTG CCCCTTGTCG GACTACCCCG GCTTTGTGGA TTGGGTGGCT
GCAGCGCCAA CGAATGCGCC CGATCTGCCG GTGCTGACCA CTGACCCTGA TAGCCCGCTG
GAATTGATCT TTACCTCAGG AACGACCGGA GATCCCAAGG GGATTGTGCT AACAAACCGC
CGCTACTGCG ACACCTCGCT GTTGGCAAAG CGCCTCTTCG GGTATCGCGA TGACGACAAG
CTGTACTCTG GTTTATCGCT GACGCACGCC AATGCGCAAA TCGTCACGCT CGGCGCGGCG
CTGGCCTGCA AGCTGCGTTG TGTTCTTTCA CGGCGCTTTA CCAAGTCACG TCTATGGAAC
ATCACCCGCA AGTATGGAGC GACCAGCTTC ACCTTATTGG GTGGCATGAC CACCGCCGTC
TACGCAGAGT TGCCAAAGCC CGACGATGCC GAAAATCCGG TTCGTTTCGT TGTCTCGGCA
GGCATGCCTG CGGCCATTTG GGGGGAATTC GAGCGTCGCT TCAATGTGCA GGTTCTTGAG
TTTTATGGTG CGGCAGAAGG GGGCTTGAGT TTCAATCACC CGGGAGCTGG ACCGGTTGGC
AGCATTGGAA AGGTGGCTCC GACACTCAAA CATCGCATCG TGGATGACCT AGGCAACGAT
GTGCCGCGTG GCGTACCAGG CGAATTGTTG TTTCGTCACG CCAATGGAGA TCCCTTCGTG
GTTGAGTATT TCGGCAATCC TGATGCGTCA ACCAAAAAAT GTGCCGGCGG TTGGTTGCAT
ATGGGTGACG TCGTGCACGA AGACGAAAAC GGTTGGCTCT TTTTCGACTA CCGCAAGGGA
AATGGCATCC GCCGGAACGG CGAGTTCATT GACACCACCT TCATTGAAAA GGTAATTGCC
GAGTCAGGCT TGGTCGATGA TGTCTACGTC TACGGCATTG CGAGCGCGAA TTTGGTGCCA
GGCGAAAAAG ACGTCGTCGC TGCCGTTGTG GCTAAGAACG CGGTCACGTT TGACCCACAA
CAGCTGTTTG AATCGTGCAG GGGCAAACTC GACGCCAGTC TCCTGCCCGG ATTCATCCAG
GTGCTCGCCC AGATTCCAAA AACAGCTTCT GAAAAACCTC AGGACCGTTT TCTAATCGAC
GCGTTCAAGC AGGACTCGCA CGCGGTTTAC CGCCGAGTCT AA
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| Protein sequence | MTTLTENILA NLIANRAAEM PDFDVLTIEG AGVCPDEVRN YRDLWDNGRR MAQVLLDLGV
QPGHRFALLM ANHAEFVEAM VAASIVGAVV VPIDPRAKGD KLHFMLENAQ CSGAFVADYA
LGNLQPLRVT LPGLRWVMGF ATNEGTCPLS DYPGFVDWVA AAPTNAPDLP VLTTDPDSPL
ELIFTSGTTG DPKGIVLTNR RYCDTSLLAK RLFGYRDDDK LYSGLSLTHA NAQIVTLGAA
LACKLRCVLS RRFTKSRLWN ITRKYGATSF TLLGGMTTAV YAELPKPDDA ENPVRFVVSA
GMPAAIWGEF ERRFNVQVLE FYGAAEGGLS FNHPGAGPVG SIGKVAPTLK HRIVDDLGND
VPRGVPGELL FRHANGDPFV VEYFGNPDAS TKKCAGGWLH MGDVVHEDEN GWLFFDYRKG
NGIRRNGEFI DTTFIEKVIA ESGLVDDVYV YGIASANLVP GEKDVVAAVV AKNAVTFDPQ
QLFESCRGKL DASLLPGFIQ VLAQIPKTAS EKPQDRFLID AFKQDSHAVY RRV
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