Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_4097 |
Symbol | |
ID | 3961795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 4570277 |
End bp | 4572646 |
Gene Length | 2370 bp |
Protein Length | 789 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637918921 |
Product | (NiFe) hydrogenase maturation protein HypF |
Protein accession | YP_525326 |
Protein GI | 89902855 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0068] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACGACTG CGTTGCCACT CGTTGCGCGT CACATCCGGG TCAGCGGCAT TGTTCAAGGG GTCGGATTCC GGCCTTTTGT CTGGCGCCTG GCGCAGGAAC TCAAGCTCAC CGGCTGGGTG CGCAATGACG CCCAGGGCGT CGAGATGGCT GCCCAGGGCG CTGAGCCCCA AGTTGCCGAA CTGTTGCAAC GTCTGCGCAC GGATGCGCCG CCGTTGGCGC GAGTTGATGC GGTGCAGGCG CGTGAGGCTT TGGTAGAAGA CTGGGCCGGT TTCTCCATCA TCGACAGCAT CCAGGGCCGC GCCGTCACGG CCATTGGCCC GGATGTTGCC GTCTGCGCCG ATTGCCTGAA CGAGCTGTTT GACCCCACGA ACAGGCGCTG GCGCCATGCT TTCATCACCT GCACGCATTG CGGCCCCCGC TTCACGGTGA CCCGCGCCTT GCCTTACGAC CGGCCGCAGA CCAGCATGGC AGCGTTCCCG CTGTGCCCGG CCTGTGGCGC TGAATACAGG GCAGCGGCGG ATCGGCGTTT TCATGCCGAG ACCACCTGTT GCCCGCAATG CGGCCCCACG CTGGCGTTGC TGGATGCGCA GCACCAGACG ATTCAAGGCG ATCCGATTGA ACGCACCTTG CACCTGCTGC AAAACGGGAA AATCGTGGCC ATCAAGGGGC TGGGCGGTTT TCACCTGGCT TGTGATGCGC GCAACCCGGA GGCGGTGGCG CGGCTTCGGT TCACCAAGAA CCGCGAAGAA AAACCCTTTG CCGTGATGCT GGCCAACGTC GCCAGCCTGG CGCCTTATGC GCAGGTATCG GATGCAGAGC GTGCTCTGCT GGAAAGCCGT GAGCGCCCCA TCGTGCTGCT GCGCGCGCGG CCAGGTGGCG ATGCCGCCTT GTGTGGTGTG GCGCCGGGCC TGCTGTGGCT GGGTGTGATG CTGCCCACGA CGCCGATCCA CTTCTTGCTG TTGCATGAGG CCGCCGGCCG ACCTGCGGGC AGCGCCTGGA CCAACAAGCC GCAGGCCATG GTGCTGGTGA TGACCAGCGC CAACCCGGGT GGTGAGCCCA TCGTGCGCGA TATGGCAGAG GCGCGCACGC GTCTGGTTGG CATTGCCGAC GCCTATCTGG ACCACGACCG CGACATCGTG GCGCGCTGCG ACGACAGCGT GGTGCGCCCG CTGGGACCGG GAGCGCAGTT CATCCGGCGC AGCCGGGGTT ACGCGCCTGT CGCCATTCGC TTGCCACACG CGGGGCCATC CGGGCTTTCC CGGCCTTGCG TGCTGGCGTT TGGCGCCCAC CTCAAAAACA CGGTGTGCGT GACCCGTGGC GATGAAGCTT TTTTGTCGCC TCACATTGGC GACCTGGACA ACGCCGCAAG CTGTGACTTC CTGAACGAGA CGGTGCAGCG CCTGTGCGAT CTGATCGACG TCAAGCCGGC GGTCGTCGCG CACGACCTGC ACCCCGACGA CTACAGCACA CGCGCTGCCC TTGAATTTGC CGATCGCCAT GGGCTGCCCA CGCTGGCTGT GCAGCATCAC CACGCCCACA TTGCCGCCGT GTGTGCCGAG CACGGCTGGC AGGGCCCCGT GTTGGGGCTG GCGCTCGATG GTGTGGGCCT GGGGACCGAC GGCAGCGCCT GGGGTGGTGA ATTGCTCAAG GTCGATGGGG CGCATTTCGA GCGCCTGGGC CACCTGTCGC CCTTGGCCAT GCCGGGTGGC GACAGGTGCG CGCGTGAGCC CTGGCGCATG GCGGCTTCGG TGCTGCATGA GTTGGGCCGC AACGCCGACA TCGTGGAGCG TTTTCAGGAG CCCGGCGCAG ATACCGTGGC CGCCATGCTG CAGCGCCAGT TCAACAGCCC GCGCACGTCG AGCATGGGCC GCGTGTTTGA TGCAGCAGCG GGTTTGCTGG GCCTCTGCTC TTATATGAAA TATGAGGCTC AAGCCCCCGT GTTGCTTGAA CAGTGTGCTA CTCTTTTTAT AGATAACCAG GGCTGGCCTG CCGCCATGGC TGAGGGCTGG ACGCTCAGTG ACCGGGGCCA ACTCAATCTG CTGCCCGTTC TGGCATCACT CCTGGGTGCC AGCGACGTCA ACCAGGCCGC CGCCCGCTTT CACGCGACCC TGGTGGCCGC CCTGACCGAC TGGGTGCTGC AAGCCTCAGC CGCCACCGGA TTGCGCACCC TGGCGTGGGG TGGTGGCTGC TTTCTCAACA CCCTGCTATC GTCAGGTCTG CGGCAAAATC TGGAACAAGG CGGCATCACC GTGCTGGCAC CGGTTCACAC GTCGCCGGGC GATGGCAGCA TCGCGCTCGG GCAGGCCTGG ATCGCCTTGA ATTCTTTGGA GACTAAAGAT GTGTCTTGCA CTACCGGTCA AAGTGATTGA
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Protein sequence | MTTALPLVAR HIRVSGIVQG VGFRPFVWRL AQELKLTGWV RNDAQGVEMA AQGAEPQVAE LLQRLRTDAP PLARVDAVQA REALVEDWAG FSIIDSIQGR AVTAIGPDVA VCADCLNELF DPTNRRWRHA FITCTHCGPR FTVTRALPYD RPQTSMAAFP LCPACGAEYR AAADRRFHAE TTCCPQCGPT LALLDAQHQT IQGDPIERTL HLLQNGKIVA IKGLGGFHLA CDARNPEAVA RLRFTKNREE KPFAVMLANV ASLAPYAQVS DAERALLESR ERPIVLLRAR PGGDAALCGV APGLLWLGVM LPTTPIHFLL LHEAAGRPAG SAWTNKPQAM VLVMTSANPG GEPIVRDMAE ARTRLVGIAD AYLDHDRDIV ARCDDSVVRP LGPGAQFIRR SRGYAPVAIR LPHAGPSGLS RPCVLAFGAH LKNTVCVTRG DEAFLSPHIG DLDNAASCDF LNETVQRLCD LIDVKPAVVA HDLHPDDYST RAALEFADRH GLPTLAVQHH HAHIAAVCAE HGWQGPVLGL ALDGVGLGTD GSAWGGELLK VDGAHFERLG HLSPLAMPGG DRCAREPWRM AASVLHELGR NADIVERFQE PGADTVAAML QRQFNSPRTS SMGRVFDAAA GLLGLCSYMK YEAQAPVLLE QCATLFIDNQ GWPAAMAEGW TLSDRGQLNL LPVLASLLGA SDVNQAAARF HATLVAALTD WVLQASAATG LRTLAWGGGC FLNTLLSSGL RQNLEQGGIT VLAPVHTSPG DGSIALGQAW IALNSLETKD VSCTTGQSD
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