Gene Rfer_4076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4076 
Symbol 
ID3961755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp4545473 
End bp4546093 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content54% 
IMG OID637918900 
ProductNapC/NirT cytochrome c-like 
Protein accessionYP_525305 
Protein GI89902834 
COG category[C] Energy production and conversion 
COG ID[COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0547067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAACA GAGTAATCGC AAAGGTGCGA AGAATGGTCT CGCGCAAAAG GGCCATTGTG 
GTGCTATTTG TCGGGTTTGC CATGGGCATA GTCGGGTTGA GCCTCTTTGG TACCAGCATG 
ATCTATACCG GCACGGAGGC CTTTTGTGCC ACCAATTGCC ACGAAATGGC TGACAACAAT 
ACCCTTGAGT ATCGCGACAC GATTCACGAC AAAAACCGCA CGGGTGTGCG CGCCATCTGC 
TCAGACTGCC ACGTGCCGCA CTCCCCGGTT CCTTTGTACA TTGCCAAAAT GGGTGCGCTC 
AATGACTTGT GGAGTCACCA CGTCACGCAT GCAGTGGACA CCAAAGACAA GTTCAACGCC 
GCGCGCCCGA TGATGGCAAC GCGCGTTTGG ACTTACATGA AAGGCAACGA CTCGCGCGAA 
TGCCGCTTTT GCCATAACGA AGCCAAGATG GATCCGACAA AGCAGACACC AGTGGCACAA 
GCCCGCCATG CCAGGGCCAA GAAGGAAAAG ATGACCTGTA TTGACTGCCA TTACGGTATT 
GCTCACACTG TGCCCGAGGG CCCGGGACCA CAGGAAATTG AAGTTGACAA GAGCTTCATC 
CCCAGAAGCG CCATTTTCTA A
 
Protein sequence
MPNRVIAKVR RMVSRKRAIV VLFVGFAMGI VGLSLFGTSM IYTGTEAFCA TNCHEMADNN 
TLEYRDTIHD KNRTGVRAIC SDCHVPHSPV PLYIAKMGAL NDLWSHHVTH AVDTKDKFNA 
ARPMMATRVW TYMKGNDSRE CRFCHNEAKM DPTKQTPVAQ ARHARAKKEK MTCIDCHYGI 
AHTVPEGPGP QEIEVDKSFI PRSAIF