Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_4073 |
Symbol | |
ID | 3961752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4542264 |
End bp | 4544252 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637918897 |
Product | cytochrome c family protein |
Protein accession | YP_525302 |
Protein GI | 89902831 |
COG category | [C] Energy production and conversion |
COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACTAG CGCGTTCTGC CCTGTGGGCA TTCTTGGTTT GTCTTGCGAG TGGGCTACTG GCTTTACCAG CCAGCGCCCA GCCGACACTG GACAACGCGA CCTGTTTAAC TTGCCACGAT GGCAAGAAGG GCAAACTTGA AGTCCCGGGG GCTGAAGGCA AAGCGCGTGC GCTGCGCAGC GTGGCGCCCG ACAAGTTTAG TGAGGGTGTT CATGCCAACA TGCAATGCGT GGCTTGCCAC ACCGACATTG CTGACAACGC TGATAAAGGC AACGCGCACG TCAAAGACCC TGCGCTCCCT CTGAAAAAGG TGGACTGCGC CGGTTGCCAC GAAGAGTTGT GGCAACAGAC GGTCAAACGC GGCAAGGAGA GCGAGCAGCC GCGGCTCGGC GTCGTTGCCA AAAACATCGA GGCGTACCGC AAGTCGTTCC ACGCTCGCCC CAATGCGGAC GACAAAACCA AGCCGAATGC TGCGTGCGAC AGCTGCCACG ACACGCACAG TTTCAATGTG CCGGTCAAGA ACTCTCCGCA ATACAACCAA TGGCGCTTGA GCATCCCGTC CGTCTGCGGT GAAAGCTGCC ACACAGACCA ATTGGAGGCT TATCTTGGCT CCGTGCATGG CAAGGAGATC AGCAAGAAGC TGCTCGCTCA AGCCGCCGTT TGTTCTGATT GCCACACTGC CCATGACATC AGCGCCACGG CCAGCACCTC TTTCAAGCTG ACGGTCTCAT CCCATTGCGG CAACTGTCAT GTGGAGAATC TCGATTCCTA CAAGGACACC TTCCACGGTC AAATCAGTAC GCTCGGCTAC GACTACACGG CCAAGTGCTA CAACTGCCAC GGTAGCCACG AGATACGGCG GGTCAATGAT CCGGAGTCCA TGGTTTATCC GACCAACCGG ATGAAGACCT GCGCCACCTG TCACAACGCC AAGAAGGGTT TGCCCGATGT GCCAGCCGGC TTTGCCAGCT ACCAGCCGCA CGGCAATGGC CATGATTTTG CCCGCTACCC GCAGATCTGG GTCGCCTGGC AGATCATGGT GCAGCTGTTG GTAGGTACCT TTGGCTTCTT CTGGTTGCAC ACAGCGCTGT GGTTCTTCCG CGAGTACAAG GAGCGCAAAC AACGCGCTGG CCAGCCGCAC ATCAAGCCTG ACTCGGTGCC TGTGCAATTT AAGGGCAAGC ATGTCCAGCG CTTTAGCCGC ACCTGGCGCA TCGCCCACTT GACCTTTGCC CTGAGCTTGA TGGTGCTGAC CCTCACCGGT ATGCCGCTGT TCTACTCGCA TGTGGCTTGG GCACCGGTGG TCATGAGTGC GCTGGGCGGA CCCCACACCG CAGGCATCAT TCACCGCGTG GCGGCAGTCA TTTTTGCCGG TGTGTTCTTC TGGCACCTGA TCTACATCAC CGTGCGCATT GCACGCGACT GGAAGAACTT CAAGTTCTTC GGCCCCAACT CCATGGTGCC GAACCTGCAG GATGGCAAAG ACATGCTCGC CATGTTCAAG TGGTTCTTCG GCCAAGGCCC GCGCCCGGTG TTTGATCGCT GGACCTACTG GGAGAAGTTC GATTACTGGG CACCGTTCTG GGGCGTCACG ATCATCGGTG TGAGTGGCCT GATCATGTGG CTGCCAGGCT TCTTTGGTGC CTTCCTGCCG GGCTGGGTGT TTAACGTGGC GGCGATCTTC CACGGTGAAG AAGCCTTCCT TGCAGTGGTG TTCCTGTTCA CAGTGCACTT CTTCAACAAC CACTTCCGCC CTGACAAGTT CCCGCTGGAA GTGGTGATGT TTACCGGCAC CTTCTCACTC GAAGAGTTCA AGCATGACCA TGGCGTGGAA TACAAGCGCC TGCTCGACAG TGGCGAACTT GAGAAGTACC TGGTGGACGC GCCGTCGCCG ACCAAGCTGG CGGCATCCAA GTTGCTGGGC TTTGTCCTGA TCACGATTGG CCTGACCTTG TTGACACTGG TCGGTATCGG GTTCTTCTCC AGCCATTGA
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Protein sequence | MRLARSALWA FLVCLASGLL ALPASAQPTL DNATCLTCHD GKKGKLEVPG AEGKARALRS VAPDKFSEGV HANMQCVACH TDIADNADKG NAHVKDPALP LKKVDCAGCH EELWQQTVKR GKESEQPRLG VVAKNIEAYR KSFHARPNAD DKTKPNAACD SCHDTHSFNV PVKNSPQYNQ WRLSIPSVCG ESCHTDQLEA YLGSVHGKEI SKKLLAQAAV CSDCHTAHDI SATASTSFKL TVSSHCGNCH VENLDSYKDT FHGQISTLGY DYTAKCYNCH GSHEIRRVND PESMVYPTNR MKTCATCHNA KKGLPDVPAG FASYQPHGNG HDFARYPQIW VAWQIMVQLL VGTFGFFWLH TALWFFREYK ERKQRAGQPH IKPDSVPVQF KGKHVQRFSR TWRIAHLTFA LSLMVLTLTG MPLFYSHVAW APVVMSALGG PHTAGIIHRV AAVIFAGVFF WHLIYITVRI ARDWKNFKFF GPNSMVPNLQ DGKDMLAMFK WFFGQGPRPV FDRWTYWEKF DYWAPFWGVT IIGVSGLIMW LPGFFGAFLP GWVFNVAAIF HGEEAFLAVV FLFTVHFFNN HFRPDKFPLE VVMFTGTFSL EEFKHDHGVE YKRLLDSGEL EKYLVDAPSP TKLAASKLLG FVLITIGLTL LTLVGIGFFS SH
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