Gene Rfer_4073 details

Gene Information

• Locus tag: Rfer_4073
• ID: 3961752
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: -
• Start bp: 4542264
• End bp: 4544252
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637918897
• Product: cytochrome c family protein
• Protein accession: YP_525302
• Protein GI: 89902831
• COG category: [C] Energy production and conversion
• COG ID: [COG2864] Cytochrome b subunit of formate dehydrogenase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGACTAG CGCGTTCTGC CCTGTGGGCA TTCTTGGTTT GTCTTGCGAG TGGGCTACTG 
GCTTTACCAG CCAGCGCCCA GCCGACACTG GACAACGCGA CCTGTTTAAC TTGCCACGAT 
GGCAAGAAGG GCAAACTTGA AGTCCCGGGG GCTGAAGGCA AAGCGCGTGC GCTGCGCAGC 
GTGGCGCCCG ACAAGTTTAG TGAGGGTGTT CATGCCAACA TGCAATGCGT GGCTTGCCAC 
ACCGACATTG CTGACAACGC TGATAAAGGC AACGCGCACG TCAAAGACCC TGCGCTCCCT 
CTGAAAAAGG TGGACTGCGC CGGTTGCCAC GAAGAGTTGT GGCAACAGAC GGTCAAACGC 
GGCAAGGAGA GCGAGCAGCC GCGGCTCGGC GTCGTTGCCA AAAACATCGA GGCGTACCGC 
AAGTCGTTCC ACGCTCGCCC CAATGCGGAC GACAAAACCA AGCCGAATGC TGCGTGCGAC 
AGCTGCCACG ACACGCACAG TTTCAATGTG CCGGTCAAGA ACTCTCCGCA ATACAACCAA 
TGGCGCTTGA GCATCCCGTC CGTCTGCGGT GAAAGCTGCC ACACAGACCA ATTGGAGGCT 
TATCTTGGCT CCGTGCATGG CAAGGAGATC AGCAAGAAGC TGCTCGCTCA AGCCGCCGTT 
TGTTCTGATT GCCACACTGC CCATGACATC AGCGCCACGG CCAGCACCTC TTTCAAGCTG 
ACGGTCTCAT CCCATTGCGG CAACTGTCAT GTGGAGAATC TCGATTCCTA CAAGGACACC 
TTCCACGGTC AAATCAGTAC GCTCGGCTAC GACTACACGG CCAAGTGCTA CAACTGCCAC 
GGTAGCCACG AGATACGGCG GGTCAATGAT CCGGAGTCCA TGGTTTATCC GACCAACCGG 
ATGAAGACCT GCGCCACCTG TCACAACGCC AAGAAGGGTT TGCCCGATGT GCCAGCCGGC 
TTTGCCAGCT ACCAGCCGCA CGGCAATGGC CATGATTTTG CCCGCTACCC GCAGATCTGG 
GTCGCCTGGC AGATCATGGT GCAGCTGTTG GTAGGTACCT TTGGCTTCTT CTGGTTGCAC 
ACAGCGCTGT GGTTCTTCCG CGAGTACAAG GAGCGCAAAC AACGCGCTGG CCAGCCGCAC 
ATCAAGCCTG ACTCGGTGCC TGTGCAATTT AAGGGCAAGC ATGTCCAGCG CTTTAGCCGC 
ACCTGGCGCA TCGCCCACTT GACCTTTGCC CTGAGCTTGA TGGTGCTGAC CCTCACCGGT 
ATGCCGCTGT TCTACTCGCA TGTGGCTTGG GCACCGGTGG TCATGAGTGC GCTGGGCGGA 
CCCCACACCG CAGGCATCAT TCACCGCGTG GCGGCAGTCA TTTTTGCCGG TGTGTTCTTC 
TGGCACCTGA TCTACATCAC CGTGCGCATT GCACGCGACT GGAAGAACTT CAAGTTCTTC 
GGCCCCAACT CCATGGTGCC GAACCTGCAG GATGGCAAAG ACATGCTCGC CATGTTCAAG 
TGGTTCTTCG GCCAAGGCCC GCGCCCGGTG TTTGATCGCT GGACCTACTG GGAGAAGTTC 
GATTACTGGG CACCGTTCTG GGGCGTCACG ATCATCGGTG TGAGTGGCCT GATCATGTGG 
CTGCCAGGCT TCTTTGGTGC CTTCCTGCCG GGCTGGGTGT TTAACGTGGC GGCGATCTTC 
CACGGTGAAG AAGCCTTCCT TGCAGTGGTG TTCCTGTTCA CAGTGCACTT CTTCAACAAC 
CACTTCCGCC CTGACAAGTT CCCGCTGGAA GTGGTGATGT TTACCGGCAC CTTCTCACTC 
GAAGAGTTCA AGCATGACCA TGGCGTGGAA TACAAGCGCC TGCTCGACAG TGGCGAACTT 
GAGAAGTACC TGGTGGACGC GCCGTCGCCG ACCAAGCTGG CGGCATCCAA GTTGCTGGGC 
TTTGTCCTGA TCACGATTGG CCTGACCTTG TTGACACTGG TCGGTATCGG GTTCTTCTCC 
AGCCATTGA 

 

Protein sequence

MRLARSALWA FLVCLASGLL ALPASAQPTL DNATCLTCHD GKKGKLEVPG AEGKARALRS 
VAPDKFSEGV HANMQCVACH TDIADNADKG NAHVKDPALP LKKVDCAGCH EELWQQTVKR 
GKESEQPRLG VVAKNIEAYR KSFHARPNAD DKTKPNAACD SCHDTHSFNV PVKNSPQYNQ 
WRLSIPSVCG ESCHTDQLEA YLGSVHGKEI SKKLLAQAAV CSDCHTAHDI SATASTSFKL 
TVSSHCGNCH VENLDSYKDT FHGQISTLGY DYTAKCYNCH GSHEIRRVND PESMVYPTNR 
MKTCATCHNA KKGLPDVPAG FASYQPHGNG HDFARYPQIW VAWQIMVQLL VGTFGFFWLH 
TALWFFREYK ERKQRAGQPH IKPDSVPVQF KGKHVQRFSR TWRIAHLTFA LSLMVLTLTG 
MPLFYSHVAW APVVMSALGG PHTAGIIHRV AAVIFAGVFF WHLIYITVRI ARDWKNFKFF 
GPNSMVPNLQ DGKDMLAMFK WFFGQGPRPV FDRWTYWEKF DYWAPFWGVT IIGVSGLIMW 
LPGFFGAFLP GWVFNVAAIF HGEEAFLAVV FLFTVHFFNN HFRPDKFPLE VVMFTGTFSL 
EEFKHDHGVE YKRLLDSGEL EKYLVDAPSP TKLAASKLLG FVLITIGLTL LTLVGIGFFS 
SH