Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_4058 |
Symbol | |
ID | 3961737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4524662 |
End bp | 4526698 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637918882 |
Product | glycosyl transferase family protein |
Protein accession | YP_525287 |
Protein GI | 89902816 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCCAG CCCTGCAACG CGCCGCCGCC TTCGCCACCG GGCAGTTTCA CCGTCTGCTG GGGGCCACCA GGCGGCATCC TGTGCGGGCC GCTTTGCTGC TGCCGGCGCT GCTGCTGCTT TACGTGCTGG TGCTGATTCC ATTCACGCCC GGCATCGGTG ACCTGCGCAA AGCCAAGGCT GAAGCACCCT CCGTGCTGCT GGCTCAAGAC GGCACGGTGC TGGCCGAGTA CAGGCGCATC AACCGCCAGT GGGTGACTTT GGACGAGATT GCGCCGAGCG TGGTGGACGC GTTGATCGCC ACCGAAGACC GCCGGTTTTA CCAGCACCAC GGGATTGACT TTCGCCGCCT GGCAGGCGCC GCTCTGAGCA CTTTGGGCGG TGATTTGCAG GGGGGCTCGA CCATCACGCA GCAGCTGGCG CGCAATCTTT ACCCCGAAGA AATCGGTCGC GCCAACAGCA TTACCCGCAA GATCAAGGAG GCCATCACCG CGCTGAAGAT CGAGGCGGTG TATTCCAAGC GCGAGATTCT GGAGACCTAC CTCAACACCG TGCCTTTTCT GTACAACGCC TTTGGCATCG AGATGGCCGC GCGGACCTAT TTTGGCAAGT CCGCCGACAA GCTCGACGTG CTGGAGAGCG CAACGCTGAT CGGCATGCTC AAGGGGACGA GCTACTACAA CCCGGTGCAG AACCCGCAGC GCGCGCTGCA GCGCCGTAAC CTGGTGCTGG AGCAGATGGC CAAAGACGGC AAGCTGGCCC CGGCCCGGCT TGCAGCGTTG TCCAAACGGC CGCTCAAACT CGATTTTGAG CGGCAAGAGG AGTCGCTGGG ACCGGCGCCG CATGTGGCCC AGCACTTGCG AAAATGGCTG ATCGACTGGG CCGACCGCAG GGGCTATAAC ATCGATGCCG ACGGCCTGCG GGTGCACACC ACCCTGGACG CCAAGTTGCA GAAGGTGGCC AACCAGGCGG TGGCGCGGCA GTTGGCAAGC CTGCAAAAGC TGGCGGACGG GCGGCGCAAG ACCGGGCAGG AGCGCGCGGT TCTGCAGGCC GGCTTTCTGG CGCTGGACCC GCGCGATGGC GCCGTGCGGG CCTGGGTGGG CAGCCGCGAC TATGCGCAGG AGCAGTTTGA CCATGTGAGC CAGGCGCGGC GCCAGCCGGG CTCGACCTTC AAGCCTTTTG TGTATGGCGC GGCGTTCATG CAGGGTTTCG ACCCGTCCTA CACCTTGATT GATCAGCCGG TAGCGATCTC GTCGCCGGGC AGCGAGGTAT GGACACCCAG CGATGCAACG CCACCCAGTG GTCTGCCCAT CAGCCTGCGC GACGGGTTGG TGTATTCCAA AAACACCATC ACCGCCCAGC TGATGCAACA AGTGGGGCCG GCCCGCGTCG GGCAGCTGGC GCGGGCCATG GGGGTGCGCC AGAGCAAGCT GGACTTGGTG CCCTCGCTCG CCCTGGGCAC CAGCCCCGTC ACGCTGATCG AGATGGTGGC AGCTTACGGC ACCATTGCCA ATGGCGGCAA CTACCTGCAG CCGTTTTTGG TGCTGCGCGT GGAAGACCGC AACGGGCAGT TGCTGGAGCA GTTCGATCCC GTCAGGGAGC CCGGGCCAGC CATGCCACGC GCGCAGGCGC TGACCCTGGT GAACGTGATG CGCGGCGTGA TTGACGAGGG CACGGGCGCC GCCATTCGCC ACCGTTACGG CATCCAGGCC GACCTGGCCG GCAAGACCGG CACCACACAA GACAACACCG ATGGCTGGTT CATCATGATG AATCCGCAAC TGGTGGCGGG CGCCCGGGTC GGCTTTAACG ACAACAGCGT GACGATGGGG TCCTGGGGCC AGGGCGCCCG CAGCGCGCTG CCCATGGTGG GGGAGGTGTT TCAGCAGGCT TTTCGCAACC GCTGGCTTGA CCCGAAGGTT GAATTCGACA TTCCGCGCCC GCGGCCACCA CCGCCCCCGG AGCCGGCGGA CAATCCGTTG AAAGGAATCG TGGACGATGT GCTGGGCGGG CTCTTGCGTC GGCTGCGCGG GGAGTGA
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Protein sequence | MTPALQRAAA FATGQFHRLL GATRRHPVRA ALLLPALLLL YVLVLIPFTP GIGDLRKAKA EAPSVLLAQD GTVLAEYRRI NRQWVTLDEI APSVVDALIA TEDRRFYQHH GIDFRRLAGA ALSTLGGDLQ GGSTITQQLA RNLYPEEIGR ANSITRKIKE AITALKIEAV YSKREILETY LNTVPFLYNA FGIEMAARTY FGKSADKLDV LESATLIGML KGTSYYNPVQ NPQRALQRRN LVLEQMAKDG KLAPARLAAL SKRPLKLDFE RQEESLGPAP HVAQHLRKWL IDWADRRGYN IDADGLRVHT TLDAKLQKVA NQAVARQLAS LQKLADGRRK TGQERAVLQA GFLALDPRDG AVRAWVGSRD YAQEQFDHVS QARRQPGSTF KPFVYGAAFM QGFDPSYTLI DQPVAISSPG SEVWTPSDAT PPSGLPISLR DGLVYSKNTI TAQLMQQVGP ARVGQLARAM GVRQSKLDLV PSLALGTSPV TLIEMVAAYG TIANGGNYLQ PFLVLRVEDR NGQLLEQFDP VREPGPAMPR AQALTLVNVM RGVIDEGTGA AIRHRYGIQA DLAGKTGTTQ DNTDGWFIMM NPQLVAGARV GFNDNSVTMG SWGQGARSAL PMVGEVFQQA FRNRWLDPKV EFDIPRPRPP PPPEPADNPL KGIVDDVLGG LLRRLRGE
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