| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4006 |
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| Symbol | |
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| ID | 3961685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4468511 |
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| End bp | 4470055 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637918830 |
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| Product | N-6 DNA methylase |
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| Protein accession | YP_525235 |
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| Protein GI | 89902764 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCGTG CACCCACAGC AAAACCCGAC AAAGAAGAAC CACTGGAAAA GCAGCTCTGG
AAAGCCGCCG ACAAGCTGCG CAAGAACATT GATGCGGCCG AATACAAGCA TGTGGTGCTT
GGCCTCATTT TCCTTAAGTA CATCTCCGAC TCCTTCGAGG AACTGTTCAC AAAGCTGCAA
GGCGGCGCAG GCGACTACGC CGGGGCCGAC CCGGAAGACA AAGACGAATA CAAGGCCGAA
AACGTCTTCT TTGTGCCGCC GCAAGCGCGC TGGTCATTTT TGTTGGGCAA GGCCAAGCAA
CCCGACGTTG GCAGCCACGT TGACGCGGCC ATGGACGCCA TCGAAAAGGA AAACCCTTCA
CTCAAGGGCG TTCTGCCCAA GGTCTTTGCC CGGCAAAATC TTGACCCCGC CAGCCTGGGC
GGGCTGATCG ACTTGGTGGG CAACATTGCA TTGGGCGACG CCAAGGCCCG CAGCGCCGAT
GTGCTGGGCC ACGTCTTTGA GTACTTCTTG GGCGAATTTG CGCTGGCCGA GGGCAAGCAG
GGCGGGCAGT TTTATACGCC GCGCTCCATC GTGGAACTGC TGGTGGTCAT GCTGGAACCC
TACAAGGGCC GGGTGTTTGA CCCCTGTTGC GGGTCCGGCG GCATGTTCGT GCAATCGGAA
AAATTCGTCA CAGAACACCA GGGCCGCATC AACGACATCT CCATCTTCGG GCAGGAAAGC
AACCAGACAA CTTGGCGCTT AGCCAAAATG AACCTGGCCA TTCGTGGCAT TGACGCATCC
CAAGTGAAAT GGAACAACGA AGGCTCCTTC CTCAACGATG CGCACAAGGA TGTAAAGGCC
GACTTCATCA TTGCCAACCC GCCCTTCAAC GTGAGCGACT GGAATGGCGA GCTGCTGCGC
AAGGACGGTC GCTGGCAATA CGGCGTGCCG CCTACCGGCA ATGCCAACTT TGCCTGGCTG
CAGCATTTCA ACCACCACCT GGCCCCCAAC GGCCGCGCCG GTGTGGTGCT GGCCAAGGGC
GCACTCACCA GCAAGAGCAG CGGTGAGGGC GACATCCGCA AGGCGATGGT GGTGGACGGC
AACCTGATCG ACTGCATCGT CAACCTGCCT GCCAAGCTGT TCCTGAACAC GCAAATTCCG
GCGGGCCTAT GGTTCATGAA CCGCGCCCGC AACAACGGCC ACCCGCGCAA GGGCGAGATT
CTGTTCATTG ATGCGCGCAA TCTCGGACAC CTCATTAACC GCCGCACGCG CGAGCTGAGC
GATGAGGACA TCCAGAAGGT TGCCAGCGTT TACCACGCCT GGCGCACCGG CGAGAGCGAG
TACGCAGACG AAAAGGGCTT CTGCGCCTCG GTGCCGCTGG CGCGGGTGGC GGAACTGGAC
TATGTGCTGA CGCCGGGGCG CTATGTGGGC CTGCCGGATG AAGAAGACGA CTTCGACTTT
GCGGAACGCT TTGCATCGTT GAAGGCCGAG TTGGAAGCCC AGCTTTTGGA GGAAGCCGAG
CTGAACCAGG CCATTGCAGA AAACTTGGCG AAGGTAAAGG TATGA
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| Protein sequence | MARAPTAKPD KEEPLEKQLW KAADKLRKNI DAAEYKHVVL GLIFLKYISD SFEELFTKLQ
GGAGDYAGAD PEDKDEYKAE NVFFVPPQAR WSFLLGKAKQ PDVGSHVDAA MDAIEKENPS
LKGVLPKVFA RQNLDPASLG GLIDLVGNIA LGDAKARSAD VLGHVFEYFL GEFALAEGKQ
GGQFYTPRSI VELLVVMLEP YKGRVFDPCC GSGGMFVQSE KFVTEHQGRI NDISIFGQES
NQTTWRLAKM NLAIRGIDAS QVKWNNEGSF LNDAHKDVKA DFIIANPPFN VSDWNGELLR
KDGRWQYGVP PTGNANFAWL QHFNHHLAPN GRAGVVLAKG ALTSKSSGEG DIRKAMVVDG
NLIDCIVNLP AKLFLNTQIP AGLWFMNRAR NNGHPRKGEI LFIDARNLGH LINRRTRELS
DEDIQKVASV YHAWRTGESE YADEKGFCAS VPLARVAELD YVLTPGRYVG LPDEEDDFDF
AERFASLKAE LEAQLLEEAE LNQAIAENLA KVKV
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