Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3940 |
Symbol | |
ID | 3961580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4406105 |
End bp | 4406782 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637918765 |
Product | FHA domain-containing protein |
Protein accession | YP_525170 |
Protein GI | 89902699 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1716] FOG: FHA domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAAAA TGATCGTATC GATCGACGGT GTTGTCATCA AGGAAGTCCA ATTGACAAAG GACCGCACGA CGCTGGGCCG GCGGCCGTAC AACGACATCG TGATCGACAA CCTGGCAGTC AGCGGCGAGC ATGCGGTGGT GCAAATGACG GGTGGACAGG TTTATCTGGA AGACCTGAAC AGCACCAATG GCACCTACGT GAACGGCAAG GCGATCAAGA AGCAGTTGCT CCAGGATGGT GACTCGGTCG AAGTCGGCAA ATACAAGATC AAATTTGTCA GCGATGTGCT CGGCGAGAGT TATGAAAAGA CCATGATGGT CAAAGCGGGT GCCAGCGGGT TGGCGCCATC CGCTGCACCG ACGTCGTTGA CGCCGCCCGC GAGCGCTGGT TTCGCGGCGC AAGCGAGTGC CGAGCCGCCG GGCGCCGCAA TCAAGGTCTT GTCAGGGGCT GCGGCCGGCC GTGAAGTGCC CTTGACCAAA GTAGTCACCA CGATCGGCAA GCCGGGTGTC GCCGTTGCCG CGATCACCCG ACGCCAGCGT GGTTTTGTCG TGCATCACGT TGAAGGGGCG GGCAACCCGA CCCTCAACGG GGCGCCCGTC GGGGCAGAGC AGGTGGCCTT GAAAAATGGC GATCTGATTG AGCTGGCCGG GACCCAAATG CAGTTTGTTC AGGCTTGA
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Protein sequence | MPKMIVSIDG VVIKEVQLTK DRTTLGRRPY NDIVIDNLAV SGEHAVVQMT GGQVYLEDLN STNGTYVNGK AIKKQLLQDG DSVEVGKYKI KFVSDVLGES YEKTMMVKAG ASGLAPSAAP TSLTPPASAG FAAQASAEPP GAAIKVLSGA AAGREVPLTK VVTTIGKPGV AVAAITRRQR GFVVHHVEGA GNPTLNGAPV GAEQVALKNG DLIELAGTQM QFVQA
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