Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3915 |
Symbol | |
ID | 3961555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4372415 |
End bp | 4373380 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637918740 |
Product | hypothetical protein |
Protein accession | YP_525145 |
Protein GI | 89902674 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAACA AATCACATGC CCTGGCCGCT GGCGCCTTTG TGCTGGTGCT GCTGGCCTTG CTGGTCGCCC TGGCGCTCTG GCTGACCCGT GACACGCAGT CGCAGCGGAT CTATGAACTC TCCAGCGCAC AGGCTGTGAC CGGCTTGCAG CCGCAAGCCA CGGTGCGCTT CAAAGGCGTG AACGTGGGCA AGGTCAGCGC CATTGGCTTT GATCCGCTCC AGCCCGGCAA CGTGCTGATC CGCATCGCCG TGGATGACAA GGCGCCGATC ACCCAGTCCA CCTTTGCCAC CCTGGGTTTT CAGGGCGTCA CCGGGCTGGC TTTCATCCAG CTCGACGACA GCGGCAGCTC CAAAGTCGCG CTGCGCGCCG ACGTGCAGCC GCCGGCGCGC ATTCCGATGC GCCCCGGCCT GTTGGCCGAA CTGTCCGAGC GCGGCCTGCG CATCCTGGGG CAACTGGACG AAACCACGCA GCGCGTCAAC AAGCTGCTGG GCGACGACAA CCAAAAGACC GTGATCGGCG CGATCGACAA CATCGGTCAG GCGGCGCGCG GCCTGCAGCA GTTTTCAGAC CGCACCGGGC AATTGCTGGA CCCCCTGGTG AAAGACACCA CCGCCACGCT CAAAATCATG CAGGCCACGT CGGTTCGGGT CGGCGACAGC GCCGACGAGG CCCGCGCCTC GGCCCGCGCC TTCAGAACCG TCACCGAGCG CATGAACCGG CCCGGCGGCA CGCTCGACCA GCTCAGCCAG GGGGCCGGCA CGCTGGCTGC CAGCGCCCAA ACCCTCAATA CCTTGACGCT GCCGCACCTC AATCATGCGC TGGGCGACAC CGCCCGCATG ACGCGCCAGG TCGGGCGGGC GGCCGCCAAC GTCAGCGACA ACCCGCAGTC CCTGCTCTTG GGCAATGGGC CGGTGGCGCC CGGCCCGGGC GAACCCGGCT TTGCTGCAAC CCCAGGTCAA CCATGA
|
Protein sequence | MENKSHALAA GAFVLVLLAL LVALALWLTR DTQSQRIYEL SSAQAVTGLQ PQATVRFKGV NVGKVSAIGF DPLQPGNVLI RIAVDDKAPI TQSTFATLGF QGVTGLAFIQ LDDSGSSKVA LRADVQPPAR IPMRPGLLAE LSERGLRILG QLDETTQRVN KLLGDDNQKT VIGAIDNIGQ AARGLQQFSD RTGQLLDPLV KDTTATLKIM QATSVRVGDS ADEARASARA FRTVTERMNR PGGTLDQLSQ GAGTLAASAQ TLNTLTLPHL NHALGDTARM TRQVGRAAAN VSDNPQSLLL GNGPVAPGPG EPGFAATPGQ P
|
| |