Gene Rfer_3875 details

Gene Information

• Locus tag: Rfer_3875
• ID: 3961477
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 4326645
• End bp: 4327289
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637918700
• Product: transport-associated
• Protein accession: YP_525105
• Protein GI: 89902634
• COG category: [R] General function prediction only
• COG ID: [COG2823] Predicted periplasmic or secreted lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.835805
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCATGA AATTTGCAAC TCAAAAACTT TTGACCCTCA TGGTGCTCAG CGCCAGTCTG 
GGCAGCACAC TGAGCGCTTG CGCCCCCGTC ATCATGGGCG GCGCCGTCAT GGGCTCGCTG 
ATGGCCACCG ACCGCCGTAC CACGGGCACA CAAATTGAAG ACGAGGGCAT TGAGCTGCAC 
GCGTCCGCCC GCATCAGCGA GAACCTCGGG GACCGGGTCC ACGTCAGCGT GACCAGCTAC 
AACCGTCAGG TGCTGTTGAC GGGCGAGGTG CCCAACGCAC AGGACAAGCA ACTGGTGGAA 
CAAGTGGTGT CACGGGTTGA AAATGTGCGC GCCATCGTCA ATGAGCTGGC GGTGCTGGGG 
CACTCCACCC TGACCCAGCG TTCTTCGGAT GCGCTGGTGA CCGGCAAGGT CAAAGCGGCT 
TTGATCGACG CCAAGGACCT GTATGCGAAC GCCTTCAAGG TGGTGACCGA GCGCGGCACC 
ACCTATTTGA TGGGACGCGT GACCCAGCGC GAAGCCAACC GGGCCACCGA CATTGCCCGC 
TCCACCGGCG GCGTGCAAAA AGTCGTGCGC GTGCTGGAGA TCATCAGCGA AGAAGAGCTG 
AAGAACCTGC TGCCCAAACC GGCCCCGGTT GAGACCAAGA AATAG 

 

Protein sequence

MTMKFATQKL LTLMVLSASL GSTLSACAPV IMGGAVMGSL MATDRRTTGT QIEDEGIELH 
ASARISENLG DRVHVSVTSY NRQVLLTGEV PNAQDKQLVE QVVSRVENVR AIVNELAVLG 
HSTLTQRSSD ALVTGKVKAA LIDAKDLYAN AFKVVTERGT TYLMGRVTQR EANRATDIAR 
STGGVQKVVR VLEIISEEEL KNLLPKPAPV ETKK