| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3860 |
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| Symbol | |
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| ID | 3961462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4309427 |
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| End bp | 4309936 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637918685 |
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| Product | peptide deformylase |
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| Protein accession | YP_525090 |
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| Protein GI | 89902619 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTAC TTCCAATTCT TTGTTATCCC GATCCCAAAC TGCACACCGT GGCCAAACCG
GTGTCAACGG TGGATGTGCG CGTTCAGACC CTGATCGTGG ATATGCTGGA AACCATGTAC
GAGGCCAAAG GCATTGGCCT GGCGGCGACC CAGATCAATG TGCACGAGCG TCTGATCGTG
GTGGATGTCT CTGAAGAACG TGACGCGCCG CTGGTGCTGA TCAACCCGCA ACTGGTCTGG
AGCAGCGCCG AGACGCACCT CAACGAAGAG GGTTGTTTGT CGGTGCCGGG TATTTACGAC
GGTGTCGAGC GTTTTGACGC CGTCACCGTG ACGGCGCTGG ACGGCCAAGG CCAGTCGCGC
CTGATTGAAG CCGAAGGCCT GCTGGCCGTG TGCATCCAGC ACGAGATGGA CCACCTGCAG
GGCAAGGTTT TTGTCGAGTA CCTGTCGCCG CTCAAGCGCA ACCGGATCAA GAAAAAAATG
CTGAAGAGCC AGCGCGAGGA GCGTGAGTGA
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| Protein sequence | MALLPILCYP DPKLHTVAKP VSTVDVRVQT LIVDMLETMY EAKGIGLAAT QINVHERLIV
VDVSEERDAP LVLINPQLVW SSAETHLNEE GCLSVPGIYD GVERFDAVTV TALDGQGQSR
LIEAEGLLAV CIQHEMDHLQ GKVFVEYLSP LKRNRIKKKM LKSQREERE
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