Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3859 |
Symbol | |
ID | 3961461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4308459 |
End bp | 4309430 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637918684 |
Product | methionyl-tRNA formyltransferase |
Protein accession | YP_525089 |
Protein GI | 89902618 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGCTGA TCTTTGCCGG CACACCCGAA TTTGCCCGCG TCGCGCTGGC CCAGCTGCAC GCGGGGGGGC ACGAGATTGC GCTGGTGCTG ACACAGCCGG ACCGGCCCGC CGGGCGCGGC ATGAAGCTGC AGGCCTCGGC CGTCAAGCAG TTCGCGCTGG ATCACGGTCT GGCGCTGGCG CAGCCGCGCA GCCTGCGGCT GGACGGCAAA TACCCTGAGG ATGCGGCTGC CGCACGGGAG GCGCTGGTGG CGGCGCAGGC CGATGCCATG GTGGTGGCCG CCTATGGCCT GATTCTGCCG CAGTGGGTGC TGGATGTGCC CGCCCGCGGC TGCTTCAATA TTCACGCTTC GCTGCTGCCG CGCTGGCGGG GCGCCGCACC GATTCACCGC GCCATCGAGG CGGGCGACGC GCAAACTGGC GTGACCATCA TGCAAATGGA CGCCGGGTTA GATACCGGCG CCATGCTGCA GGCGCAGGCG ATCCCGATCG GGGCGGGCGA CACCACCGGC AGCCTGCATG ACCGGCTGGC CGAGCTGGGC GCACAGTTGA TGTTGCAAGT GCTGGCGCAG GCGGTCCATG GCAGTTTGCA GCCGGTGGCG CAGGCCGCAC AAGGCGTGAC GTACGCCCCC AAAATTGAAA AACACGAGGC GGCCATCGAT TGGACGCAGC CCGCTGCGGT GATCGCGCAG CGCATCCGTG CCTTCAATCC ATTCCCCGGC GCCACGGCGG TTTTGAATGG AGAAACGCTG AAGATATGGC TGGCAGACGT CGCACCGGGT GTTCCACCCG TTTCCAAGGA ATTTGGATCA ATTCTGGCTG TAGCCCCCGT CGGAATTGAA GTAGTTGCTA TGAAATCAAT AGTCAACATC ACACAGCTGC AGCGCCCCGG CGGTAAGCGC TTGGGCGTGG CCGAGTTTCT GCGCGGGTTT GACCTGCAGC CCGGCATGGT TTTTGAGAGG CACGGCAGCT AG
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Protein sequence | MRLIFAGTPE FARVALAQLH AGGHEIALVL TQPDRPAGRG MKLQASAVKQ FALDHGLALA QPRSLRLDGK YPEDAAAARE ALVAAQADAM VVAAYGLILP QWVLDVPARG CFNIHASLLP RWRGAAPIHR AIEAGDAQTG VTIMQMDAGL DTGAMLQAQA IPIGAGDTTG SLHDRLAELG AQLMLQVLAQ AVHGSLQPVA QAAQGVTYAP KIEKHEAAID WTQPAAVIAQ RIRAFNPFPG ATAVLNGETL KIWLADVAPG VPPVSKEFGS ILAVAPVGIE VVAMKSIVNI TQLQRPGGKR LGVAEFLRGF DLQPGMVFER HGS
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