| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3833 |
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| Symbol | |
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| ID | 3961435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4278237 |
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| End bp | 4280042 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637918658 |
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| Product | AMP-binding domain protein |
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| Protein accession | YP_525063 |
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| Protein GI | 89902592 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCGG ACCGCTATGC TTGTCACTGC GATGGCTATC CGGGCTTGTG CCCACTTGGG
GGAATTACCA TGACACCAAA ACCTGCGGAC ACTTTGCGTG CGCCCGCCTT GACCTGCAGC
CTGTCCAGCG GCGCGACCGA TGTGCCCTTG ATCGAGCAAA CGCTGGGCGA CTTCTTTGAC
GCCATCGTGG CGCGCCAGCC CGAGCACGAA GCGCTGGTCA GCGCGCACCA GCACCAGCGC
TACAGCTACC GCGCGCTGCA AACAGCGAGT AATCAACTGG CCAGTGCCTT GCTGGGCCTG
GGCTTGAAGC CGGGCGAGCG CGTCGGGATC TGGTCGCATA ACAACGCGCA GTGGCTGCTG
ATGCAACTGG CCACCGCCAA GGTGGGTTTG ATTCTGGTCA ACATCAACCC GGCCTACCGC
GTGGCCGAGC TGGGCTATGC CCTGAACAAG GTGGCGTGCA AGGTGTTGGT GACCATGGCC
CGCTTCAAGA CCAGTGACTA CCTGGGCATG CTGCGTGAAT TGGCACCTGA GTTGGACACG
GCGCAGCCGG GCGCCTTGCA GGCGGCCCGC CTGCCGCATT TGCGCACGGT GGTGTGGCTC
GATGAGCCGG GCCAGGCCGA CGAAGCGCCG GGTTTGCTGC GCTTCTCGAC GTTGCTGGCT
TCGGGGGACG CGGCCGACCC GCGGCTGGAA ACCATTGCCA GCACGCTGCG CGCCAGCGAC
CCGATCAACA TCCAATTCAC CAGCGGCACC ACCGGCTTCC CCAAGGGCGC CACACTGACG
CACCGCAATA TTCTGAACAA CGGCTTCTTC ATCGGTGAAG CCATGAAGCT CACCTCCAAG
GATCGCCTGT GTATTCCGGT TCCGCTTTAC CACTGCTTTG GCATGGTGCT GGGCAACCTG
GCCTGCCTCA CGCACGGCGC GACCATTGTT TATCCGAGTG ATGGTTTCGA TGCGCTGGCC
GTGCTGCAAA CCGTGCAGGA CGAAAAATGC ACCGGCCTGC ACGGCGTGCC CACCATGTTC
ATCGCCGAGC TGGACCACCC GCGCTTTGCC GAGTTCGACC TGACCAGCCT GCGCACCGGC
ATCATGGCCG GCTCGCCGTG TCCGATCGAG GTCATGAAGC GGGTGATGCG CGACATGCAC
ATGCTGGAAG TCACCATTGC CTACGGCATG ACCGAAACCA GCCCGGTCAG TTGCCAGAGC
AGCACCACGA CGCCGCTGGA AAAACGGGTG GCCACCGTCG GCCTGGTGCA GCCCCATTTG
CAGGTCAAGG TGATTGATCC GGTCAGTGGA GAAACAGTGG CGCCGGGCGT GTCAGGCGAG
CTGTGCACGC GCGGTTACTC GGTCATGCAC GGCTACTGGG AAGACCCGGT CCGCACCGCC
GAGGCGATTG ACGAGCAGGG CTGGATGCAC ACCGGCGACC TGGCGACCAT GGACATTGAG
GGCTATGTCA ACATCGTCGG GCGCATCAAG GACATGGTGA TCCGCGGCGG TGAAAATATC
TACCCGCGCG AGATTGAAGA GTTTCTCTAT CGCCACCCCC AGATTCAGGA CGTGCAGGTG
GTGGGCATCC CGGACCCCAA ATATGGTGAG GAGCTGTGCG CCTGGATCAT CGCCAAGCCG
GGCCAGACCC TGAGCGAGAT TGAAGTCAAA GCCTTCTGCA AGGGCCAGAT TGCGCACTAC
AAGGTGCCCC GCTACATTCG CTTTGTGAGC GGGTTCCCGA TGACCGTGAC CGGCAAGATC
CAGAAGTTCA AAATTCGGGA TGACATGAAG CAGCAGCTTG GACTGCAAGA AGACAAAACG
GCCTGA
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| Protein sequence | MASDRYACHC DGYPGLCPLG GITMTPKPAD TLRAPALTCS LSSGATDVPL IEQTLGDFFD
AIVARQPEHE ALVSAHQHQR YSYRALQTAS NQLASALLGL GLKPGERVGI WSHNNAQWLL
MQLATAKVGL ILVNINPAYR VAELGYALNK VACKVLVTMA RFKTSDYLGM LRELAPELDT
AQPGALQAAR LPHLRTVVWL DEPGQADEAP GLLRFSTLLA SGDAADPRLE TIASTLRASD
PINIQFTSGT TGFPKGATLT HRNILNNGFF IGEAMKLTSK DRLCIPVPLY HCFGMVLGNL
ACLTHGATIV YPSDGFDALA VLQTVQDEKC TGLHGVPTMF IAELDHPRFA EFDLTSLRTG
IMAGSPCPIE VMKRVMRDMH MLEVTIAYGM TETSPVSCQS STTTPLEKRV ATVGLVQPHL
QVKVIDPVSG ETVAPGVSGE LCTRGYSVMH GYWEDPVRTA EAIDEQGWMH TGDLATMDIE
GYVNIVGRIK DMVIRGGENI YPREIEEFLY RHPQIQDVQV VGIPDPKYGE ELCAWIIAKP
GQTLSEIEVK AFCKGQIAHY KVPRYIRFVS GFPMTVTGKI QKFKIRDDMK QQLGLQEDKT
A
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