Gene Rfer_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3804 
Symbol 
ID3962931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4244489 
End bp4244917 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content58% 
IMG OID637918630 
Producthypothetical protein 
Protein accessionYP_525035 
Protein GI89902564 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000216317 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTGGA TTAAATCGCT TCACATTGTT TTCGTTGCCA GCTGGTTTGC CGGCCTGTTC 
TACCTGCCGC GCATCTTTGT CAACTTGGCC ATGGTGCCTG CTGATTCTGC CCCCGAGCGT
GAGCGGCTGT TATTGATGGC GCGCAAATTA CTTCGCTTTA CCAGCCTGAT CGCGGTGCCC
GCCGTGGGCT TGGGCGTGTG GTTGTGGGCA GGTTTTGGCA TTGGCTGGGG ACCGGGCAAT
GGCTGGATGC ATGCCAAGCT GGCCGTGGTG GCGCTGGCAT TGGGCTACCA CCACAGTTGT
GGCGTTTTGC TGCGCAAGTT TGTGGCCAAT CACAACAGTC ATGGCCACGT CTGGTACCGC
TGGTTCAATG AGGCGCCGGT ACTGATATTG CTGGCGGCGG TGCTGCTGGT GGTAGTCAAG
CCGTTCTGA
 
Protein sequence
MLWIKSLHIV FVASWFAGLF YLPRIFVNLA MVPADSAPER ERLLLMARKL LRFTSLIAVP 
AVGLGVWLWA GFGIGWGPGN GWMHAKLAVV ALALGYHHSC GVLLRKFVAN HNSHGHVWYR
WFNEAPVLIL LAAVLLVVVK PF