Gene Rfer_3798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3798 
Symbol 
ID3962925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4238230 
End bp4240332 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content55% 
IMG OID637918624 
Productelongation factor G 
Protein accessionYP_525029 
Protein GI89902558 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000136641 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCC ATACCCCCAT TGAGCGCTAC CGCAATATCG GTATTTCGGC TCACATTGAC 
GCCGGTAAAA CCACCACCAC CGAGCGCATT CTTTTTTATA CCGGCATCAA TCACAAGATT
GGTGAAGTGC ATGACGGCGC TGCCACCATG GACTGGATGG AGCAGGAGCA AGAACGTGGT
ATCACGATCA CCTCGGCGGC CACCACCTGC TTCTGGAAAG GCATGGAAAA CAACTTTGCC
GAGCACCGCA TCAACATCAT CGATACCCCT GGACACGTCG ATTTCACCAT TGAGGTCGAG
CGTTCCATGC GTGTCCTCGA CGGTGCCTGC ATGGTCTATT GTGCCGTGGG TGGTGTGCAG
CCGCAGTCTG AGACCGTTTG GCGTCAGGCC AACAAGTACA AAGTGCCTCG CCTGGCATTT
GTGAACAAGA TGGACCGCAC CGGGGCCAAC TTCTTCAAAG TCGTGGACCA GATGAAGCTG
CGCCTCAAGG CTAGCCCTGT GCCCATGGTG ATTCCAATCG GCGCGGAAGA AAATTTCACT
GGCGTGGTCG ACTTGCTCAA AATGAAAGCC ATCATTTGGG ATGAGGCGTC ACAAGGTATG
TTGTTTGACT ACCGTGAGAT TCCCGCCGAG CTGCTGGAGC TGGCCAAGGA ATGGCGTGAG
AAGATGGTTG AGGCTGCCGC CGAAGCGTCT GAAGAGCTCA TGAACAAATA CCTCGAAGAG
GGTGATTTGA CCGAAGACGA GATCAAATTC GGTATTCGTA CCCGCACCAT CGCCAGCGAA
ATCCAGCCAA TGTATTGTGG CTCCGCGTTC AAGAACAAAG GCGTGCAGCG CATGCTGGAT
GCCGTGGTTG AATTCATGCC GTCGCCAGTC GATATTCCTC CGGTCAAGGG GATGGACGAA
GACGAAAACC CGGTGGTACG CCAGGCTAAC GACACCGAGA AATTTTCCGC CCTCGCTTTC
AAGCTGATGA CCGACCCGTT TGTGGGGCAG TTGACCTTTG TGCGCGTCTA CTCGGGTGTC
CTGCAAAAAG GGGATAGTGT CTACAACCCG ATTCGTGGCA AGAAGGAACG CATTGGGCGG
ATTGTGCAGA TGCACGCCAA CAATCGCCAA GAGGTGAGCG AAATTGTCGC GGGCGATATT
GCGGCTTGTG TCGGTTTGAA AGACGTGACG ACCGGTGAGA CCCTGTGCGA TCCCGGTGCC
ATCATCATGC TCGAGCGCAT GGTGTTCCCT GAGCCCGTCA TTACGCAGGC TGTGGAGCCC
AAGACCAAGG TTGACCAGGA AAAAATGGGT ATCGCTTTGC AGCGTTTGGC GCAAGAAGAT
CCTTCCTTCC GCGTCAAAAC GGATGAAGAG TCCGGTCAGA CCCTGATCGC CGGTATGGGC
GAGTTGCACC TCGAAATCAT TGTTGACCGC ATGAAGCGCG AATTTGGCGT TGAAGCCAAT
GTGGGCAAGC CGCAAGTGGC CTACCGCGAA ACCATTCGCA AGACGGTCGA AGATGCCGAA
GGCAAATTCG TGCGCCAATC GGGCGGCAAG GGTCAGTACG GGCACGTCGT GCTCAAGATT
GAGCCGAACG AACCCGGCAA GGGCATTCAG TTCATCGACG CTATCAAGGG TGGTGTTGTT
CCGCGCGAAT TCATCCCTGC GGTTGAAAAA GGCATTAACG AGGCTGTGAC CTCGGGCGTG
CTGGCGGGTT ACCCGGTGGT TGATGTCAAG GTGACGCTGC ATTTCGGCTC CTACCACGAT
GTGGATTCGA ATGAAAACGC CTTCAAGATG GCGGCCATTT TTGGCTTCAA AGAAGGTTGT
CGCAAGGCGG GTCCGGTGAT TCTGGAACCC ATGATGGCTG TGGAAGTCGA AACACCAGAA
GACTACGCCG GCAACGTGAT GGGCGATTTG TCCTCACGTC GCGGCATGGT GCAAGGCATG
GAAGACATGG TTGGTGGTGG CAAGGCCATC AAGGCGGAGG TACCCTTGTC TGAAATGTTC
GGCTACTCCA CCACGCTACG TTCCATGTCA CAAGGTCGCG CGACCTACAC CATGGAATTT
AAGCACTACA CCGAAGCGCC GCGCAACGTG TCCGAAGCCA TCATGGCGGC TAGGGCCAAA
TAA
 
Protein sequence
MARHTPIERY RNIGISAHID AGKTTTTERI LFYTGINHKI GEVHDGAATM DWMEQEQERG 
ITITSAATTC FWKGMENNFA EHRINIIDTP GHVDFTIEVE RSMRVLDGAC MVYCAVGGVQ
PQSETVWRQA NKYKVPRLAF VNKMDRTGAN FFKVVDQMKL RLKASPVPMV IPIGAEENFT
GVVDLLKMKA IIWDEASQGM LFDYREIPAE LLELAKEWRE KMVEAAAEAS EELMNKYLEE
GDLTEDEIKF GIRTRTIASE IQPMYCGSAF KNKGVQRMLD AVVEFMPSPV DIPPVKGMDE
DENPVVRQAN DTEKFSALAF KLMTDPFVGQ LTFVRVYSGV LQKGDSVYNP IRGKKERIGR
IVQMHANNRQ EVSEIVAGDI AACVGLKDVT TGETLCDPGA IIMLERMVFP EPVITQAVEP
KTKVDQEKMG IALQRLAQED PSFRVKTDEE SGQTLIAGMG ELHLEIIVDR MKREFGVEAN
VGKPQVAYRE TIRKTVEDAE GKFVRQSGGK GQYGHVVLKI EPNEPGKGIQ FIDAIKGGVV
PREFIPAVEK GINEAVTSGV LAGYPVVDVK VTLHFGSYHD VDSNENAFKM AAIFGFKEGC
RKAGPVILEP MMAVEVETPE DYAGNVMGDL SSRRGMVQGM EDMVGGGKAI KAEVPLSEMF
GYSTTLRSMS QGRATYTMEF KHYTEAPRNV SEAIMAARAK