| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3796 |
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| Symbol | rpsJ |
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| ID | 3962923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4236536 |
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| End bp | 4236850 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637918622 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_525027 |
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| Protein GI | 89902556 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000453996 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTACCA AACAAAAAAT CCGTATTCGT CTGAAGGCTT TTGATTACAA ACTCATCGAC
CAGTCGGCCG CCGAGATTGT AGATACCGCC AAACGCACTG GCGCCATTGT TAAAGGCCCG
GTGCCTTTGC CAACGCGCTT TAAACGTTTT GACATCCTGC GTTCGCCGCA CGTCAACAAA
ACCAGTCGCG ACCAGTTCGA AATCCGCACG CACCAGCGCC TGATGGATAT CGTTGACCCG
ACGGATAAAA CCGTTGATGC GTTGATGAAA CTTGATCTTC CTGCGGGTGT GGATGTCGAG
ATCAAGCTGC AATAG
|
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| Protein sequence | MATKQKIRIR LKAFDYKLID QSAAEIVDTA KRTGAIVKGP VPLPTRFKRF DILRSPHVNK
TSRDQFEIRT HQRLMDIVDP TDKTVDALMK LDLPAGVDVE IKLQ
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