| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3795 |
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| Symbol | rplC |
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| ID | 3962922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4235651 |
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| End bp | 4236337 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637918621 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_525026 |
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| Protein GI | 89902555 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000167739 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTCTGA GCAACTCCCT AGGGTTGCTG GGCCGCAAGG TGGGCATGAT GCGCCTATTC
ACCGATGAGG GGGATTCAAT CCCTGTCACG GTGGTAGACG TCTCTAACAA CCGTGTGACT
CAGGTCAAAA CCCAAGAGAA TGACGGCTAC GTCGCCTTGC AGGTGACGTT TGGTGCGCGC
AAAGCTTCGC GCGTCACCAA GCCTGCGGCT GGGCACCTTG CAAAAGCAGG TGTTGAAGCA
GGTGAAATCA TCCGCGAATT CCGCCTGACC GCCGATGTGG CTGCGCAGTA CAAAGCAGGC
GCAACGGTGC CTGTGACGGC TGTGTTTGCT GTCGGCCAAA AGGTCGATGT GCAGGGTACT
ACCATTGGTA AAGGCTTTGC CGGCACGATC AAGCGCCACC ACATGAAGTC GCAGCGCGCG
TCGCACGGTA ACAGCCGTTC GCACAATGTG CCAGGTTCCA TTGGTATGGC CCAGGATCCA
GGTCGCGTGT TTCCTGGCAA ACGCATGACG GGTCACTTGG GAGATGACAC GGTCACCACC
CAAAACCTGG ATGTGATTCG CATTGACGAA GCTCGTCAAC TGCTGATGAT TAAGGGTGCT
GTTCCTGGCT CAGCCGGCGG TTTTGTAACC GTTCGTCCTG CTGTCAAGGT CAAAGCCAAC
AATACTGACG TGAAAGGAGC GAACTGA
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| Protein sequence | MSLSNSLGLL GRKVGMMRLF TDEGDSIPVT VVDVSNNRVT QVKTQENDGY VALQVTFGAR
KASRVTKPAA GHLAKAGVEA GEIIREFRLT ADVAAQYKAG ATVPVTAVFA VGQKVDVQGT
TIGKGFAGTI KRHHMKSQRA SHGNSRSHNV PGSIGMAQDP GRVFPGKRMT GHLGDDTVTT
QNLDVIRIDE ARQLLMIKGA VPGSAGGFVT VRPAVKVKAN NTDVKGAN
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