Gene Rfer_3782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3782 
Symbol 
ID3962415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4226266 
End bp4227957 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content58% 
IMG OID637918608 
ProductSSS family solute/sodium (Na+) symporter 
Protein accessionYP_525013 
Protein GI89902542 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.804193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGTC TATCGCAATT TAAAGGCGCG ATCGCGCTGT TCTCACTGCT GGCACTTTCC 
GCCGGAGCTT ATGCGGCCGG AGCCGATCTG GGTCAAGCGG TCAAGCAGAC CACCAACTGG
ACCGCGATCG GCATGTTTGC CACCTTCGTT ATTCTGACAC TGGGCATCAC CAAATGGGCG
GCCTCCCGCA CCAAGAGCGC GTCTGACTTC TATACCGCCG GCGGTGGCAT TACCGGCTTT
CAAAACGGAC TGGCGATTGC GGGCGACTAC ATGTCGGCCG CTTCGTTTCT GGGTATTTCG
GGGCTGGTGT TTGCCAACGG CTTTGACGGC CTGATCTTCT CCATCGGCTG GCTGGTCGGC
TGGCCGATCA TCACTTTCCT GATGGCCGAG CGCTTACGCA ACTTGGGCAA ATTTACTTTT
GCTGACGTGG CCGGTTATCG CTTCAGTCAA ACGCCGATCC GCATCTTCGC TGCCTGCGGC
TCGCTGGTGG TCGTGGCCTT TTACATGATC GCCCAGATGG TCGGCGCTGG CCAACTCATC
AAGTTGCTAT TTGGACTGGA ATACCTGTAC GCTGAAATCC TGGTGGGCTC GATCATGATG
ATGTACGTGC TGTTTGGCGG TATGACCGCC ACCACCTGGG TGCAAATCAT CAAGGCCTGC
ATGCTGCTCG GTGGTGCCAC CTTCATGGCG TTCTCGGTGT TGCTTCAATT TGGCTTCTCG
CCTGAAATGA TGTTTGAGAA AGCAATTGAA GTGCACTCAA AGAAAGACGC CATCATGGCC
CCGGGTGGTC TGATCAAGGA CCCAATCTCG GCGATTTCGG TCGGCATGGC GTTGATGTTC
GGCACCGCTG GCTTGCCCCA CATCCTGATG CGCTTCTTTA CGGTACCTAG CGCCAAAGAA
GCACGCAAGT CAGTCGGCTG GGCAACCACC TGGATCGGTT ATTTCTACAT CCTGACCTTC
ATCATCGGCT TTGGCGCTAT CACCAACCTG ATTCCCAACC CGATGGACTA CTTTGTTGGT
GGTGACATCA GCAAAGGTCT GAACGGCGGC GGCAACATGG CGGCAGTGCA TCTGTCCAAG
GCAGTCGGCG GCAACGTGTT CATGGGCTTT ATCTCGGCCG TGGCATTTGC CACCATTCTG
GCCGTGGTCG CTGGCCTGAC GCTATCGGGT GCCTCGGCGG TTTCGCACGA CCTGTACGCG
TCGGTCTGGA GAAAAGGTCG GGTTGACCAG GCAGATGAGT TGCGGGTCTC CAAAATCACC
ACCGTGGCGT TGGGCATCAT CGCCGTCACG CTGGGCATCG CGTTTGAAAA AGAAAACGTG
GCCTACATGG TGATGCTGGC GTTCGTGATT GCGGCCTCGG CTAACTTCCC AGTGCTGTTC
ATGTCGGTTC TGTGGAAAGA CTGCACCACC AAAGGGGCAG TGGCCGGCGG TTTTGTCGGT
CTGATCATGG CTGTGGTGTT GACGATTCTC TCGCCCAGTG TCTGGGTGGC CGTCATGCAC
CATCCAGCGG GCTCGGCCTG GTTCCCGTAT GACTCGGCGG CGATCTTCTC GATCCCGGCC
GCGTTCTTGA CCATCTGGCT GGTCTCTACG TTCGACCGCA GTGCACGTGC AGCTGTTGAT
CGGGCTGGCT ATCCAGCGCA AGAGGTCCGA TCTGAGACCG GCATCGGATC GGCGTCAGCG
TCAGGCCATT GA
 
Protein sequence
MTRLSQFKGA IALFSLLALS AGAYAAGADL GQAVKQTTNW TAIGMFATFV ILTLGITKWA 
ASRTKSASDF YTAGGGITGF QNGLAIAGDY MSAASFLGIS GLVFANGFDG LIFSIGWLVG
WPIITFLMAE RLRNLGKFTF ADVAGYRFSQ TPIRIFAACG SLVVVAFYMI AQMVGAGQLI
KLLFGLEYLY AEILVGSIMM MYVLFGGMTA TTWVQIIKAC MLLGGATFMA FSVLLQFGFS
PEMMFEKAIE VHSKKDAIMA PGGLIKDPIS AISVGMALMF GTAGLPHILM RFFTVPSAKE
ARKSVGWATT WIGYFYILTF IIGFGAITNL IPNPMDYFVG GDISKGLNGG GNMAAVHLSK
AVGGNVFMGF ISAVAFATIL AVVAGLTLSG ASAVSHDLYA SVWRKGRVDQ ADELRVSKIT
TVALGIIAVT LGIAFEKENV AYMVMLAFVI AASANFPVLF MSVLWKDCTT KGAVAGGFVG
LIMAVVLTIL SPSVWVAVMH HPAGSAWFPY DSAAIFSIPA AFLTIWLVST FDRSARAAVD
RAGYPAQEVR SETGIGSASA SGH