Gene Rfer_3717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3717 
Symbol 
ID3963251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4147374 
End bp4148588 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content61% 
IMG OID637918543 
Producthypothetical protein 
Protein accessionYP_524948 
Protein GI89902477 
COG category[N] Cell motility 
COG ID[COG1749] Flagellar hook protein FlgE 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.493119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTTC AAACCGGACT CTCAGGGCTC AATGCCTCCA GCCGCAGCCT GGATGTCATC 
GGCAATAACA TTGCCAATGC CAACACCACG GGCATGAAAT CATCACGCGC CGAATTCGGC
GACCTGGTGG CATCCTCCCT TGGCGCGGGG GGCTCCAGTG GTGCCGGCAT CGGCGTGGCG
GTGGGCTCCA TCTCCCAACA GTTTTCACAG GGCAACATCA ACATCACCGG TAACGATCTT
GATGTGGCCA TCAACGGCGG CGGCTTCTTC CAGTTGGCCT TGCCCGATGG CTCGGCCGCT
TACACGCGCG ACGGCTCGTT CAAACTCGAT GCCAACGGCT ATATCAAGAC CAACAGTGGC
GCCAACGTGT TGGGTTATCC CACCGACAAA ACCGGCAAGA CAACCAGCGT AAAACCTGAA
ATATTGCAGC TCCCCACCAG CGCGCCCATT GCCGCCAGCG CGACCACGGC CATCTCCGCC
GAACTCAACC TGGATGCGCG CGCCCCGATA GCCACTTCTG TCACGCCACC CACACCAAGA
AGCACCTACG GCACCTCCTT GACCGCCTAT GACTCGCAAG GCGTGACGAT GCCGGTCAAC
CTCTATTTCA GCAAGGTAAC GCCCACCACG GCAGGAACGG ACCAGTGGGC GGTTTACGAC
TCGCCCACGG GCGCCTCCGT TGGGTCCCTG GTGTTTGACG CCAGTGGCGC ACTGCAAAGC
TCGACCATGG GCTCGTTGAC CCTGACCCCG GCACCGCCGA GCATCGTGCC CGCCTTTCCG
GTCACGGTGG ACGTCAGCAA AGTGACGCAG TTCGGCGCTG CCTTCGCGGT GTCCAACCTG
ACCCAGGACG GCTATGCGCC GGGCGAACTC ACCGGATTGA AAATTGGCGA AAACGGCCAA
ATCACGGCAC GCTATTCCAA CGGCCAGACC CAGATCGCAG GTCAATTGTC ATTGGCCGAT
TTCCGCAATG TGCAAGGACT CTCACCCATC GGCGGCAACA GCTGGGTTGC AAGCTATACC
TCAGGAGACC CCGTGTTGGG CTCGCCTGGC GTCGGCAAAT TTGGCGCCCT GCGCTCAGGT
GCCCTGGAAG AATCGAACGT CGATCTGACG GCCGAGCTGG TCAATATGAT GACCGCGCAG
CGCGCCTACC AGGCTAACGC CCAGACCATC AAGACGCAGG ATCAGGTGAT GTCAACCCTG
GTCAACCTGC GCTGA
 
Protein sequence
MSFQTGLSGL NASSRSLDVI GNNIANANTT GMKSSRAEFG DLVASSLGAG GSSGAGIGVA 
VGSISQQFSQ GNINITGNDL DVAINGGGFF QLALPDGSAA YTRDGSFKLD ANGYIKTNSG
ANVLGYPTDK TGKTTSVKPE ILQLPTSAPI AASATTAISA ELNLDARAPI ATSVTPPTPR
STYGTSLTAY DSQGVTMPVN LYFSKVTPTT AGTDQWAVYD SPTGASVGSL VFDASGALQS
STMGSLTLTP APPSIVPAFP VTVDVSKVTQ FGAAFAVSNL TQDGYAPGEL TGLKIGENGQ
ITARYSNGQT QIAGQLSLAD FRNVQGLSPI GGNSWVASYT SGDPVLGSPG VGKFGALRSG
ALEESNVDLT AELVNMMTAQ RAYQANAQTI KTQDQVMSTL VNLR