Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3717 |
Symbol | |
ID | 3963251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 4147374 |
End bp | 4148588 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637918543 |
Product | hypothetical protein |
Protein accession | YP_524948 |
Protein GI | 89902477 |
COG category | [N] Cell motility |
COG ID | [COG1749] Flagellar hook protein FlgE |
TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.493119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATTTC AAACCGGACT CTCAGGGCTC AATGCCTCCA GCCGCAGCCT GGATGTCATC GGCAATAACA TTGCCAATGC CAACACCACG GGCATGAAAT CATCACGCGC CGAATTCGGC GACCTGGTGG CATCCTCCCT TGGCGCGGGG GGCTCCAGTG GTGCCGGCAT CGGCGTGGCG GTGGGCTCCA TCTCCCAACA GTTTTCACAG GGCAACATCA ACATCACCGG TAACGATCTT GATGTGGCCA TCAACGGCGG CGGCTTCTTC CAGTTGGCCT TGCCCGATGG CTCGGCCGCT TACACGCGCG ACGGCTCGTT CAAACTCGAT GCCAACGGCT ATATCAAGAC CAACAGTGGC GCCAACGTGT TGGGTTATCC CACCGACAAA ACCGGCAAGA CAACCAGCGT AAAACCTGAA ATATTGCAGC TCCCCACCAG CGCGCCCATT GCCGCCAGCG CGACCACGGC CATCTCCGCC GAACTCAACC TGGATGCGCG CGCCCCGATA GCCACTTCTG TCACGCCACC CACACCAAGA AGCACCTACG GCACCTCCTT GACCGCCTAT GACTCGCAAG GCGTGACGAT GCCGGTCAAC CTCTATTTCA GCAAGGTAAC GCCCACCACG GCAGGAACGG ACCAGTGGGC GGTTTACGAC TCGCCCACGG GCGCCTCCGT TGGGTCCCTG GTGTTTGACG CCAGTGGCGC ACTGCAAAGC TCGACCATGG GCTCGTTGAC CCTGACCCCG GCACCGCCGA GCATCGTGCC CGCCTTTCCG GTCACGGTGG ACGTCAGCAA AGTGACGCAG TTCGGCGCTG CCTTCGCGGT GTCCAACCTG ACCCAGGACG GCTATGCGCC GGGCGAACTC ACCGGATTGA AAATTGGCGA AAACGGCCAA ATCACGGCAC GCTATTCCAA CGGCCAGACC CAGATCGCAG GTCAATTGTC ATTGGCCGAT TTCCGCAATG TGCAAGGACT CTCACCCATC GGCGGCAACA GCTGGGTTGC AAGCTATACC TCAGGAGACC CCGTGTTGGG CTCGCCTGGC GTCGGCAAAT TTGGCGCCCT GCGCTCAGGT GCCCTGGAAG AATCGAACGT CGATCTGACG GCCGAGCTGG TCAATATGAT GACCGCGCAG CGCGCCTACC AGGCTAACGC CCAGACCATC AAGACGCAGG ATCAGGTGAT GTCAACCCTG GTCAACCTGC GCTGA
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Protein sequence | MSFQTGLSGL NASSRSLDVI GNNIANANTT GMKSSRAEFG DLVASSLGAG GSSGAGIGVA VGSISQQFSQ GNINITGNDL DVAINGGGFF QLALPDGSAA YTRDGSFKLD ANGYIKTNSG ANVLGYPTDK TGKTTSVKPE ILQLPTSAPI AASATTAISA ELNLDARAPI ATSVTPPTPR STYGTSLTAY DSQGVTMPVN LYFSKVTPTT AGTDQWAVYD SPTGASVGSL VFDASGALQS STMGSLTLTP APPSIVPAFP VTVDVSKVTQ FGAAFAVSNL TQDGYAPGEL TGLKIGENGQ ITARYSNGQT QIAGQLSLAD FRNVQGLSPI GGNSWVASYT SGDPVLGSPG VGKFGALRSG ALEESNVDLT AELVNMMTAQ RAYQANAQTI KTQDQVMSTL VNLR
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