Gene Rfer_3681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3681 
Symbol 
ID3964049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4101164 
End bp4102117 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content61% 
IMG OID637918497 
ProductLysR family transcriptional regulator 
Protein accessionYP_524912 
Protein GI89902441 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.555356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTGA CCGAACTCAA ATACATTGTG GCCGTGGCGC GTGAGCGCCA CTTTGGCAAG 
GCGGCGGAGG CCTGCTATGT GTCGCAGCCC ACGCTCTCGG TGGCTGTCAA AAAGCTCGAA
GAAGAGCTCG ATGTCAAGCT CTTTGAGCGC AGCGCCAATG AAGTCACGGT CACGCATCTG
GGTGAAGAGA TTGTGCGCCA GGCGCAAAGC GTGCTGGAGC AGGCTAGCGC CATCAAGGAG
ATGGCCAAGC GTGGCAAAGA CCCGTTGGCC GGACCGCTGA CGCTGGGCAT CATCTACACC
ATTGGCCCGT ATCTGTTGCC TGACCTGGTG CGCCAGATGA TCAGTCACAC GCCGCAAATG
CCGCTGATGC TGCAAGAAAA CTTCACCGTC AAACTGCTGG AGATGCTGCG CACGGGTGAA
ATTGACTGCG CCATTCTGGC CGAGCCATTC CCGGATGCCG GGCTGGCGAT TGCGCCGCTG
TATGACGAGC CCTTTCTGGC GGTGGTGCCG GCCAATCATC CCTTGGCCGC GCAGACTCAG
GTGACGACCG AACAACTCAA ACAAGAGACG ATGCTGTTGC TGGGCAGCGG CCACTGTTTT
CGCGACCACG TGCTGGAGGT CTGCCCGGAG TTCGCGCGTT TTTCTACCAA TGCCGAGGGT
ATCCGCCGCA GTTTTGAAGG CTCCTCCCTG GAGACCATCA AGCACATGGT CGCGGCCGGC
ATGGGCGTCA CGCTGGTGCC GCGTCTGAGC GTGCCCAAAG AGGCGCTGGC GCTCAAACCC
CGGCGCAAAC GCGATGAAGA TCCGTATGTG AAATACCTGC CGTTTGAGGG CGACCCGCCC
AAGCGCCGCG TGGTGCTGGC GTGGCGGCGC AGCTTCACGC GTTATGAGGC GATTGCCGCC
CTGCGCAATG CCATCTACGC CTGCGAATTG CCGGGCGTAC AGCGTTTATC CTGA
 
Protein sequence
MTLTELKYIV AVARERHFGK AAEACYVSQP TLSVAVKKLE EELDVKLFER SANEVTVTHL 
GEEIVRQAQS VLEQASAIKE MAKRGKDPLA GPLTLGIIYT IGPYLLPDLV RQMISHTPQM
PLMLQENFTV KLLEMLRTGE IDCAILAEPF PDAGLAIAPL YDEPFLAVVP ANHPLAAQTQ
VTTEQLKQET MLLLGSGHCF RDHVLEVCPE FARFSTNAEG IRRSFEGSSL ETIKHMVAAG
MGVTLVPRLS VPKEALALKP RRKRDEDPYV KYLPFEGDPP KRRVVLAWRR SFTRYEAIAA
LRNAIYACEL PGVQRLS