| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3678 |
|---|
| Symbol | |
|---|
| ID | 3964046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 4097768 |
|---|
| End bp | 4099258 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637918494 |
|---|
| Product | glycerol kinase |
|---|
| Protein accession | YP_524909 |
|---|
| Protein GI | 89902438 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0554] Glycerol kinase |
|---|
| TIGRFAM ID | [TIGR01311] glycerol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTATT TGCTCGCCCT TGACCAGGGC ACCTCCAGCT CGCGCAGCAT TGTGTTCAAT
GCCCAGGGGC AAGTGGTGGC CCAGGCGCAG CAGGAACTCA CGCAAATCTA CCCGCAACCC
GGCTGGGTCG AGCACGATCC GCTTGAAATC TGGCGTACCC AGCTGGCCAC CGCACGTGAG
GTGCTGGCCA AGGCCGGTAT CGAGGCCCGT GAGGTGCGCG CGTTGGGCAT CACCAACCAG
CGCGAAACCA CCGTGGTGTG GAGCCGCAAA ACCGGTGCGC CAATTCACAA CGCGATCGTC
TGGCAGGACC GGCGGGCCGA GCCCACCTGC GTGGAGCTGC GCGCACGCGG CCTGACACCC
ACGGTCCAGG CCAAAACCGG CTTGCTGGTT GACGCCTATT TCTCCGGCAC CAAGCTGAAA
TGGATTCTGG ACCACGTCCC TGGCGCGCGC CAGCAGGCCG AAAACGGCGA ACTGGCCTTT
GGCACGGTGG ACAGTTGGCT GATCTGGCAG CTCACCCACG GCACCGTTCA CGCCACCGAT
GTCAGCAACG CCTCGCGCAC CATGCTGTTC AATGTGCACA GCAACCAGTG GGACGATGAA
CTGCTGCGGG CGCTTGATAT TCCGGCCAAG CTGCTGCCCG CTATCAAGCC CTCCAGCGCG
CTGTTTGGCG AGGTCAGCCC AGATTTATTG GGTGCTGCCA TCCCGATCGG CGGCGTGGCA
GGCGACCAGC AAAGCGCCTT GTTCGGCCAG GCCTGCTTCA AGCCCGGGAT GGTGAAGAAC
ACCTATGGCA CCGGCTGCTT CATGCTGATG CACACCGGCC ACAGCTTCCA GTCTTCTGCC
AACGGCCTGA TCACCACCAG TGCGGCACAA ACCACGGCGC AGCCTGAATT TGCCATGGAA
GGCAGTGTGT TTGTCGGCGG CGCCGTGGTG CAGTGGTTGC GCGACGGCTT GCGCGCTATT
CCGAGCAGCT CCGAAGTGCA GGCGCTGGCC GAGAGCGTGC CTGACGCGGG CGGCGTGATG
GTGGTGCCCG CCTTCACCGG ACTGGGAGCG CCCTACTGGA AGCCAGACGC GCGCGGCACC
ATCACGGGCT TGAGCCGTGG CAGCACGCTG GCGCACATCG CCCGCGCGGC GCTGGAGAGC
ATTGCCTTTC AAAGCGCCGC GCTGCTGCAG GCCATGAGCC GCGACGCCGT GCAGGCTGGC
GGCAGCGCGG TGGCGGAGCT GCGCGTCGAT GGCGGCGCTT GCGTCAACGA CCTGCTGATG
CAATTTCAGG CCGACTTGTT GGGCATTGCG GTGGTGCGCC CGGCGGTGAT TGAAACCACC
GCACTCGGCG CCGCTTACCT GGCCGGGCTG GCCACCGGCG TTTACCGAAG TACGGACGAA
ATCAGTACGC TGTGGCAAGC CGAGCGACGC TTTTTGCCCG CGCTGGCGCC CGCGCGTGCG
GCTGAACTGA TGGAACACTG GGAGCATGCG GTGCGGCAAA CCGTGCTTTG A
|
|---|
| Protein sequence | MTYLLALDQG TSSSRSIVFN AQGQVVAQAQ QELTQIYPQP GWVEHDPLEI WRTQLATARE
VLAKAGIEAR EVRALGITNQ RETTVVWSRK TGAPIHNAIV WQDRRAEPTC VELRARGLTP
TVQAKTGLLV DAYFSGTKLK WILDHVPGAR QQAENGELAF GTVDSWLIWQ LTHGTVHATD
VSNASRTMLF NVHSNQWDDE LLRALDIPAK LLPAIKPSSA LFGEVSPDLL GAAIPIGGVA
GDQQSALFGQ ACFKPGMVKN TYGTGCFMLM HTGHSFQSSA NGLITTSAAQ TTAQPEFAME
GSVFVGGAVV QWLRDGLRAI PSSSEVQALA ESVPDAGGVM VVPAFTGLGA PYWKPDARGT
ITGLSRGSTL AHIARAALES IAFQSAALLQ AMSRDAVQAG GSAVAELRVD GGACVNDLLM
QFQADLLGIA VVRPAVIETT ALGAAYLAGL ATGVYRSTDE ISTLWQAERR FLPALAPARA
AELMEHWEHA VRQTVL
|
|---|
| |