Gene Rfer_3652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3652 
Symbol 
ID3963980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4069150 
End bp4070937 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content62% 
IMG OID637918470 
Productasparagine synthase, glutamine-hydrolyzing 
Protein accessionYP_524885 
Protein GI89902414 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0367] Asparagine synthase (glutamine-hydrolyzing) 
TIGRFAM ID[TIGR01536] asparagine synthase (glutamine-hydrolyzing)
[TIGR03104] asparagine synthase family amidotransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGGCA TTTGCGGTGA ATTGCGTTTT GACGGCGCCG CGCCGGATCT GGCAGCCATT 
GCGCGCATGT CAGCGCAACT GGCGCGCCGT GGGCCGGATG ACGCGGGCAC TTACCAGAAT
GGCCCGCTGG CGTTTGGCCA CCGGCGCCTG TCCATCATTG ACTTGTCAGC TGCGGCGCAC
CAGCCGATGG TGGACGCTGC GCTGCAGTTG GCGCTGGTTT TTAACGGCAC GATTTACAAC
TACCGGGAGT TGCGCGACGA GTTGCTCAGC ATGGGCTACA CGTTTTTTTC GGAAGGCGAC
AGCGAAGTCA TCCTGAAGGC CTACCACGCC TGGGGCGACC AATGTGTCAA GCGCTTTATT
GGCATGTTTG CCTTTGCCAT CTGGGATCAG CGCAGCGACC AGCTGTTTCT GGCACGGGAC
CGCTTTGGCA TCAAGCCCCT GTACCTGAAC CAGACCGGTC AACGCCTGCG CTTTGCGTCC
AGCCTGCCCG CGCTGCTGGC GGGCGGCGGG GTGGACACCA CGCTCGATGC GGTGGCGTTG
CACCACCACT TCACCCTGCA CACGGTGGTG CCCGCGCCGC GCACGGTGCT CCAGGGCGTG
CGCAAACTGC CACCCGCGTC GACCTTGCGG CTGGAGCCGG ACGGCACCAG CACCCAGCAG
GTTTACTGGA CACTGGACGC GACACGGCCG GACAAGGCGC TGTCCGAGGC CCAATGGCTG
GCCGCCACGC GCGCGCAACT CGCTCTTAGC GTCAAACGCC GCCTGCTGGC AGCGGACGTG
CCGGTCGGTG TGCTGCTCTC GGGCGGGCTC GATTCCAGCC TGCTGGTCGG ACTGCTGGCA
AGCCAGGTGC CTGATTTGCG CACCTTCTCG ATCGGTTTTG AAGGCGTGGG CGCAGGGTCG
GAAAAAGCCG ACGAATTTGA ATACTCTGAC CAAATTGCCC AGCAATTTCA CACCCGGCAT
CACCAGTTCA GCATTCCCAA CCATGAAGTG ATGCAGCGCC TGCCGGAAGC CGTCGCACAA
ATGACCGAAC CGATGGTCAG CCACGACGTG ATTGCGTTTT ACTTGCTGGC CGAGCGGGTT
TCCAAAGAAG TCAAAGTGGT GATGTCCGGC CAGGGCGCCG ACGAGGTATT TGGCGGCTAC
TTCTGGTACC CCAAGATGGA CGCCGCCCAG GGCTCGCCTT TGGCGCGCTT CAGCCAGCAC
TACTTTGACC GCGACCATGC TGAATATCTG CAAATGATCG CCCCCGCCTT TCAGGTCGGC
GATGTCACAT CCAAGCTGAT TGCCGGCGAA CTGAGCAAAC CACAAGCCGA CACTTTTCTG
GACCAGGTCT GGCGGCTCGA TGCCACCACG CTGATCGTGG ACGACCCGGT CAAGCGCGTG
GACAACATGC CGATGGCCTG GGGCCTGGAG GTGCGCGTGC CGTTTCTGGA CCACGAACTG
GTGGAACTGG CGGCGCACAT GCCACCCGAA CTCAAACTCA AGGAAGGCGG CAAGTTTGCA
CTCAAAGCGA TCTCTCGCGG GCTGATTCCA GACGCGGTGA TTGACCGGCC CAAAGGCTAC
TTTCCGGTGC CCGCGCTCAA ATACGTGCGC GGCCCCTTTC TGGAACTGAT GCGAGGCATT
CTGATGTCGC ACGCCTGCAT CGAGCGCGGG CTGTACCAGC GCGAGTACGT GAACAAACTG
CTGGCCGATC CGGAAGCACC CGAGCACTTC ACCCGCATCC AGGGCAGCAA GCTATGGCAC
CTGGCGCTGC TGGAGTGGTG GCTGCAGGTG CACGTGGACA ATTTGTAA
 
Protein sequence
MCGICGELRF DGAAPDLAAI ARMSAQLARR GPDDAGTYQN GPLAFGHRRL SIIDLSAAAH 
QPMVDAALQL ALVFNGTIYN YRELRDELLS MGYTFFSEGD SEVILKAYHA WGDQCVKRFI
GMFAFAIWDQ RSDQLFLARD RFGIKPLYLN QTGQRLRFAS SLPALLAGGG VDTTLDAVAL
HHHFTLHTVV PAPRTVLQGV RKLPPASTLR LEPDGTSTQQ VYWTLDATRP DKALSEAQWL
AATRAQLALS VKRRLLAADV PVGVLLSGGL DSSLLVGLLA SQVPDLRTFS IGFEGVGAGS
EKADEFEYSD QIAQQFHTRH HQFSIPNHEV MQRLPEAVAQ MTEPMVSHDV IAFYLLAERV
SKEVKVVMSG QGADEVFGGY FWYPKMDAAQ GSPLARFSQH YFDRDHAEYL QMIAPAFQVG
DVTSKLIAGE LSKPQADTFL DQVWRLDATT LIVDDPVKRV DNMPMAWGLE VRVPFLDHEL
VELAAHMPPE LKLKEGGKFA LKAISRGLIP DAVIDRPKGY FPVPALKYVR GPFLELMRGI
LMSHACIERG LYQREYVNKL LADPEAPEHF TRIQGSKLWH LALLEWWLQV HVDNL