Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3652 |
Symbol | |
ID | 3963980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 4069150 |
End bp | 4070937 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637918470 |
Product | asparagine synthase, glutamine-hydrolyzing |
Protein accession | YP_524885 |
Protein GI | 89902414 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) [TIGR03104] asparagine synthase family amidotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCGGCA TTTGCGGTGA ATTGCGTTTT GACGGCGCCG CGCCGGATCT GGCAGCCATT GCGCGCATGT CAGCGCAACT GGCGCGCCGT GGGCCGGATG ACGCGGGCAC TTACCAGAAT GGCCCGCTGG CGTTTGGCCA CCGGCGCCTG TCCATCATTG ACTTGTCAGC TGCGGCGCAC CAGCCGATGG TGGACGCTGC GCTGCAGTTG GCGCTGGTTT TTAACGGCAC GATTTACAAC TACCGGGAGT TGCGCGACGA GTTGCTCAGC ATGGGCTACA CGTTTTTTTC GGAAGGCGAC AGCGAAGTCA TCCTGAAGGC CTACCACGCC TGGGGCGACC AATGTGTCAA GCGCTTTATT GGCATGTTTG CCTTTGCCAT CTGGGATCAG CGCAGCGACC AGCTGTTTCT GGCACGGGAC CGCTTTGGCA TCAAGCCCCT GTACCTGAAC CAGACCGGTC AACGCCTGCG CTTTGCGTCC AGCCTGCCCG CGCTGCTGGC GGGCGGCGGG GTGGACACCA CGCTCGATGC GGTGGCGTTG CACCACCACT TCACCCTGCA CACGGTGGTG CCCGCGCCGC GCACGGTGCT CCAGGGCGTG CGCAAACTGC CACCCGCGTC GACCTTGCGG CTGGAGCCGG ACGGCACCAG CACCCAGCAG GTTTACTGGA CACTGGACGC GACACGGCCG GACAAGGCGC TGTCCGAGGC CCAATGGCTG GCCGCCACGC GCGCGCAACT CGCTCTTAGC GTCAAACGCC GCCTGCTGGC AGCGGACGTG CCGGTCGGTG TGCTGCTCTC GGGCGGGCTC GATTCCAGCC TGCTGGTCGG ACTGCTGGCA AGCCAGGTGC CTGATTTGCG CACCTTCTCG ATCGGTTTTG AAGGCGTGGG CGCAGGGTCG GAAAAAGCCG ACGAATTTGA ATACTCTGAC CAAATTGCCC AGCAATTTCA CACCCGGCAT CACCAGTTCA GCATTCCCAA CCATGAAGTG ATGCAGCGCC TGCCGGAAGC CGTCGCACAA ATGACCGAAC CGATGGTCAG CCACGACGTG ATTGCGTTTT ACTTGCTGGC CGAGCGGGTT TCCAAAGAAG TCAAAGTGGT GATGTCCGGC CAGGGCGCCG ACGAGGTATT TGGCGGCTAC TTCTGGTACC CCAAGATGGA CGCCGCCCAG GGCTCGCCTT TGGCGCGCTT CAGCCAGCAC TACTTTGACC GCGACCATGC TGAATATCTG CAAATGATCG CCCCCGCCTT TCAGGTCGGC GATGTCACAT CCAAGCTGAT TGCCGGCGAA CTGAGCAAAC CACAAGCCGA CACTTTTCTG GACCAGGTCT GGCGGCTCGA TGCCACCACG CTGATCGTGG ACGACCCGGT CAAGCGCGTG GACAACATGC CGATGGCCTG GGGCCTGGAG GTGCGCGTGC CGTTTCTGGA CCACGAACTG GTGGAACTGG CGGCGCACAT GCCACCCGAA CTCAAACTCA AGGAAGGCGG CAAGTTTGCA CTCAAAGCGA TCTCTCGCGG GCTGATTCCA GACGCGGTGA TTGACCGGCC CAAAGGCTAC TTTCCGGTGC CCGCGCTCAA ATACGTGCGC GGCCCCTTTC TGGAACTGAT GCGAGGCATT CTGATGTCGC ACGCCTGCAT CGAGCGCGGG CTGTACCAGC GCGAGTACGT GAACAAACTG CTGGCCGATC CGGAAGCACC CGAGCACTTC ACCCGCATCC AGGGCAGCAA GCTATGGCAC CTGGCGCTGC TGGAGTGGTG GCTGCAGGTG CACGTGGACA ATTTGTAA
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Protein sequence | MCGICGELRF DGAAPDLAAI ARMSAQLARR GPDDAGTYQN GPLAFGHRRL SIIDLSAAAH QPMVDAALQL ALVFNGTIYN YRELRDELLS MGYTFFSEGD SEVILKAYHA WGDQCVKRFI GMFAFAIWDQ RSDQLFLARD RFGIKPLYLN QTGQRLRFAS SLPALLAGGG VDTTLDAVAL HHHFTLHTVV PAPRTVLQGV RKLPPASTLR LEPDGTSTQQ VYWTLDATRP DKALSEAQWL AATRAQLALS VKRRLLAADV PVGVLLSGGL DSSLLVGLLA SQVPDLRTFS IGFEGVGAGS EKADEFEYSD QIAQQFHTRH HQFSIPNHEV MQRLPEAVAQ MTEPMVSHDV IAFYLLAERV SKEVKVVMSG QGADEVFGGY FWYPKMDAAQ GSPLARFSQH YFDRDHAEYL QMIAPAFQVG DVTSKLIAGE LSKPQADTFL DQVWRLDATT LIVDDPVKRV DNMPMAWGLE VRVPFLDHEL VELAAHMPPE LKLKEGGKFA LKAISRGLIP DAVIDRPKGY FPVPALKYVR GPFLELMRGI LMSHACIERG LYQREYVNKL LADPEAPEHF TRIQGSKLWH LALLEWWLQV HVDNL
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