| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3648 |
|---|
| Symbol | |
|---|
| ID | 3962761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 4063211 |
|---|
| End bp | 4063681 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637918466 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_524881 |
|---|
| Protein GI | 89902410 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCTG ATTCGCTGGA CAACACTGAC CGCAAACTGC TCGATGCCCT GCAACACGAC
GCGCGGCAGA CGGTCGCAGA TCTGGCGCAA TTGGTGTCGC TCTCACCCTC GCCTTGCTGG
CGTCGCGTGC GCCAGCTTGA AGAATCCGGC GTGATCGAGG GTTACCACGC GCAACTGAGC
CGCGCCAAAC TGGGCTATGG CGTGACCGGC TTTGTGCATC TGCAAATGGA CAATCACTCG
CCCGACATCA TGGCGGCGTT CGAGCGTGAA GTGGTGGCGT TGCCGCAAGT GCTGTCCTGC
CACAACCTGT CGGGCCGGTA TGACTACCAG ATCGAGGCGA TTGCCCCCGA TCTGGAGTCG
TTTTCGCAAC TGGTGCGGGT CAAAATTCGC AGCCTGCCGG GGGTGAAAGA AATCTCCACC
AGCTTTTCGC TCAAGGAAGT CAAGCGCGCC GGCACCTTGC CTGTCAATTG A
|
|---|
| Protein sequence | MSSDSLDNTD RKLLDALQHD ARQTVADLAQ LVSLSPSPCW RRVRQLEESG VIEGYHAQLS
RAKLGYGVTG FVHLQMDNHS PDIMAAFERE VVALPQVLSC HNLSGRYDYQ IEAIAPDLES
FSQLVRVKIR SLPGVKEIST SFSLKEVKRA GTLPVN
|
|---|
| |