| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3590 |
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| Symbol | |
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| ID | 3962582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3995777 |
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| End bp | 3997141 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918406 |
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| Product | sun protein |
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| Protein accession | YP_524825 |
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| Protein GI | 89902354 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0840523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGTCTC GTGCTGACGC AGCAGGTGCA ACTTTGACAA CGAATGCAAG TGAACAAAAA
ATTCCTTTGT GGCGACAGCT GCAGGCGGTA GCCGCTGTTT TGCTGGGCGT ACGCGCCGGC
ATGTCTGCAA CGGCTGCGCT GGAAGGGGTG ACGGCCGATT TGCGGCCAGG CGTGCAGTCA
CTGGTTTTCC ATGCGCTGCG CTCACTCGGG CGCGCTGAAG CTCTGCGCCA GTTGCTTGCG
CCCCGTAGTC CGCCGCCGCC CGCCGACGCG TTACTCTGCA CTGCGTTGGC GCTGGCGTGG
CGTGAGCAGG ATGCGCCGTA TGAGGTGTTT ACCCTGGTCA ATCAGACGGT GGAAGCCGCC
AAAAGAAGTC CGGCAACCCA GCCCCAGGCC CGTTTTATCA ATGCCTGCTT GCGTCGATTC
TTGCGTGAGC GTGACACCTT GGTGCAACTC ACCGATCAAA ATCCGGTGGC GTTGTGGAAT
CACCCCCTGT GGTGGATCAA ACGGCTCCAG AAGGACTGGC CGGACCAGTG GCAAAGCATT
CTTGCGGCCA ATAACCGTCA CGCACCCATG ACCCTGCGGA TGAACCTGAG ACGGTCCGCC
GTGTTGCCCT ACTTGCAGTT GCTCAAAGAT GCCGGCTTGA ATGCCAGCGC TGCGGGAAGC
TCGGGTGTGA CGCTTGAACA AGCCAAGCCA GTGCAGGCCT TACCCGGCTT TGCCGAGGGC
CTGTTTTCGG TACAGGACGC TGCCGCGCAG TTGGCTGCAC CGCTGCTCCT GTCGGGCTTG
GCGGCGGCTG GATCGCCGCA GATACTGGAT GCCTGTGCCG CCCCAGGCGG GAAAACCGCG
CACCTGCTGG AGATAACCGA GGGCAAGGTC ACGGCGCTGG ATGTTGATCC CGCGCGCTGC
GAGCGAATTC ATCAAACGCT GCAACGCCTG GGACTAGAGG CACGGGTGCT GGTGGCTGAC
GCGGCCAACG TTTCAGCCTG GTGGGATGGT CAGCTTTTTG ACGCCATTTT GCTGGATGCG
CCCTGTACTG CGTCTGGCAT TGTGCGACGG CACCCCGACG TGCGCTGGTT ACGGCGCGAG
TCGGACATCG CCCAACTGGT CGCAACGCAG GCCAGGCTGC TCAAAGCCCT GTGGCAAGTG
CTCAAGCCGG GTGGCCGGCT CTTGTATTGC ACCTGTTCCG TTTTCAGAGC GGAGGGCGGG
AATCAGATAC AAACGTTTCT TGCACACAAC ACCGAAGCCA GTTTACTGCC TTCGCCGGGG
CATTTATTGC CAGTTAACCG GGTGACTGGC GACGCCGTCC CGGACAATCC AATCGGTGAC
CATGACGGCT TTTATTACGC ACTGCTTGAG AAACGCGCGG CTTGA
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| Protein sequence | MWSRADAAGA TLTTNASEQK IPLWRQLQAV AAVLLGVRAG MSATAALEGV TADLRPGVQS
LVFHALRSLG RAEALRQLLA PRSPPPPADA LLCTALALAW REQDAPYEVF TLVNQTVEAA
KRSPATQPQA RFINACLRRF LRERDTLVQL TDQNPVALWN HPLWWIKRLQ KDWPDQWQSI
LAANNRHAPM TLRMNLRRSA VLPYLQLLKD AGLNASAAGS SGVTLEQAKP VQALPGFAEG
LFSVQDAAAQ LAAPLLLSGL AAAGSPQILD ACAAPGGKTA HLLEITEGKV TALDVDPARC
ERIHQTLQRL GLEARVLVAD AANVSAWWDG QLFDAILLDA PCTASGIVRR HPDVRWLRRE
SDIAQLVATQ ARLLKALWQV LKPGGRLLYC TCSVFRAEGG NQIQTFLAHN TEASLLPSPG
HLLPVNRVTG DAVPDNPIGD HDGFYYALLE KRAA
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