Gene Rfer_3580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3580 
Symbol 
ID3961425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3982673 
End bp3983599 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content63% 
IMG OID637918395 
Productbeta-lactamase-like 
Protein accessionYP_524815 
Protein GI89902344 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACAAC CACCCACACT GCCCGAGCAC ATCACCATTT TCGAGCGCGG CTGGCTCTCG 
TCCAACAACA TTTTGCTGCT TGGCGGCGAC ACCTGCGCGC TGATTGACAG CGGTTATGTC
ACCCATGCGC CGCAAACACT CGCGCTGGTG CAGGCGGCGC TGAAAGGTCG AGCGCTCGAC
GTGCTGGTCA ACACCCACCT GCACAGCGAC CACTGCGGCG GCAACGCAGC GCTGCAGAGC
GCTTACCCGG CGCTCATGAC CCATATCCCG CCCGGACAGG CCCGCTTCGT CAGCCACTGG
GACCCGCACG CGCTCACCTA CACGCCCACC GGGCAGAGTT GCCCACAGTT CCGCTTCGAT
GCGCTGCTGC TGCCGGGCAG CGAGCTCAGG CTCGGCGACC AGCTGTGGCA GGTGCACGCC
GCACCGGGGC ACGACCCGCA CTCGGTGATT TTGTTTGAAC CGGCCTCCCG GACCCTGATT
TCAGCCGATG CCTTGTGGGA ACGCGGCTTT GGCGTGGTGT TCCCGGAACT CGAAGGACTG
GATGCGTTTG ACGCCGTCGG CAAAACCATC GATCTGATTG AGTCGCTGGC GCCAAAATGG
GTGATTCCGG GGCATGGCAG CGCCTTTGAC GGTGTCGAAC AATCCATTGC CGTGGCGCGC
GCCCGCCTGC ACAGCTTTGT CACGCAGCCG GCCAAACACA TCAGCTACGC CGCCAAAGTG
TTGCTGAAGT TCAAGCTGCT CGAAGTGCAA GCCATCGCGT TGGACGATTT CATCGCCTGG
GCCTGCGCCA CCCCCTATTT CGCAACGATC TTCAGGCAGC ATTTCCCGGA GCTGGATTTC
GCGCACGGGA TCGAGCAACT GATTGGGGAC TTGGTCAAGT CAGGCGCCGC ATCGCGGAAC
GGCGTGATGG TTCGCAACGC CGGATGA
 
Protein sequence
MPQPPTLPEH ITIFERGWLS SNNILLLGGD TCALIDSGYV THAPQTLALV QAALKGRALD 
VLVNTHLHSD HCGGNAALQS AYPALMTHIP PGQARFVSHW DPHALTYTPT GQSCPQFRFD
ALLLPGSELR LGDQLWQVHA APGHDPHSVI LFEPASRTLI SADALWERGF GVVFPELEGL
DAFDAVGKTI DLIESLAPKW VIPGHGSAFD GVEQSIAVAR ARLHSFVTQP AKHISYAAKV
LLKFKLLEVQ AIALDDFIAW ACATPYFATI FRQHFPELDF AHGIEQLIGD LVKSGAASRN
GVMVRNAG