| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3565 |
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| Symbol | pdxA |
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| ID | 3961410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3963695 |
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| End bp | 3964690 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637918380 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_524800 |
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| Protein GI | 89902329 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0496515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACCGTC CTTTGATTGC CATCACCATG GGAGACGCAG CTGGTATCGG CCCCGAAATC
ATCATGAAGA GCCTTGCTAA GCCCGCGCTA TATGAAACCT GTCGGCCGCT GGTTATCGGT
GATGCTGCCC GACTGCGCCA GGCCGGCGCG CTGTGTGGCG TTGACCTGCA AGTCAAAGTC
CGCACCCGTA TCGAGGAAGC CACATTTACC TTCGGGCAAG TGGACTGTCT GGATCTCGGG
CTCATTCCAG CGGATCTGCC CTTCGGCAAG TTATCCGCAA TAGCGGGTGA TGCCGCTTAT
CGCTATGTCG CCAAAGCAGT GGAATTGATC AAAGCGGACA TCGCTGACGC CATTTGCACG
GCACCGCTGA ACAAGGAAGC TCTGCACGCG GGCGGTCACT TGTTCCCCGG CCATACCGAA
ATGCTGGCCC ACCTGACCGG TACGCCGGAA GTTTCCATGA TGCTGGTCGC TCCAAAACTG
CGGGTGATTC ACGTGACAAC GCACATGGGC TTACTCGACG CCATCGATCG TATCGAGCCC
GGCTTGGTCG AGCGGACGAT CGCCCGTGGC CACGACACCT TGGTGCGCGC AGGAATTCCT
CAGCCCCGTA TCGGCGTCTG CGCGATCAAC CCCCATGCCG GGGAAAACGG TCTGTTTGGG
CGAGGCGAAG AGGAACAGAA AATCACGCCA GCCATCACCG CCTGCTTGGC CAGAGGCTGG
CAGATAGAAG GTCCATTGCC CGCCGATACG CTGTTCTTCC GTGCCGGACG CGGCGATTTC
GATCTGGTGG TGGCTATGTA CCACGACCAG GGTCACGGCC CCATCAAGGT GCTCGGCATT
GAAGCCGGCG TTAATGTTAC CGTTGGCCTA CCAGTGATTC GCACGTCAGT CGACCATGGC
ACGGCATTCG ACATCGCCGG GCAAGGAGTT GCCGACGAGC GCTCCATGTT GGAAGCCTTG
CGCCAGGCGA TTGAATTGGC AACCCGGCGC GGGTAG
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| Protein sequence | MYRPLIAITM GDAAGIGPEI IMKSLAKPAL YETCRPLVIG DAARLRQAGA LCGVDLQVKV
RTRIEEATFT FGQVDCLDLG LIPADLPFGK LSAIAGDAAY RYVAKAVELI KADIADAICT
APLNKEALHA GGHLFPGHTE MLAHLTGTPE VSMMLVAPKL RVIHVTTHMG LLDAIDRIEP
GLVERTIARG HDTLVRAGIP QPRIGVCAIN PHAGENGLFG RGEEEQKITP AITACLARGW
QIEGPLPADT LFFRAGRGDF DLVVAMYHDQ GHGPIKVLGI EAGVNVTVGL PVIRTSVDHG
TAFDIAGQGV ADERSMLEAL RQAIELATRR G
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