Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3560 |
Symbol | |
ID | 3961152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3960269 |
End bp | 3960934 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637918375 |
Product | hypothetical protein |
Protein accession | YP_524795 |
Protein GI | 89902324 |
COG category | [S] Function unknown |
COG ID | [COG4380] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0259131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTGGA AAAAATATTT TAAAGTACTG GCTGTGACCG CCAGCTTCCT CGTGATGACG GGATGCGCGA CCAAAGCACC ACCTTTCGAT TACACCGCGT ACAAGGAAAG CCGTCCACGC TCCATTTTGA TCTTGCCGCC GGTGAACAAC ACACCTGAAG TGCAGGCCTC GTACAGCGTG CTGTCCCATG CCACCCGACC ACTTGCCGAG GCCGGCTACT ACGTGATGCC CGTAACCTTG GTGGCCGAAG CCTTCAAGGA AAACGGGATG ACGCAAGCAA CTGATATGCA CGCGACGCCG GTCGACAAGT TGCGCCAGAT ATTTGGCGCG GATGCGGCCC TGTACATCAC AATCGGCAAG TACGGAACGG TGTACCAGGT GATCAGCAGT GCCTCGGTCG TCTCGGCCGA AGCCAAGTTG GTGGACTTGA AAACCGGCAA GTTGCTGTGG ACCGGCGCCG CTTCTGCCTC CAGCGAAGAG GGGCGAAGCC AGCAGCAAGG GGGATTGGCC GGGTTGTTGA TTACGGCCAT CATCAAACAG GTGATGGCGA CTGCGCTGGA TCAAAGTCAT CAGGTTGCGG GCGTTGCCAC TACGCGCCTG TTGTCGGCAG GTACGGCCAA CGGTATGTTG TACGGGCCAC GCTCGCCGAA CTACGACAAA AACTAG
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Protein sequence | MNWKKYFKVL AVTASFLVMT GCATKAPPFD YTAYKESRPR SILILPPVNN TPEVQASYSV LSHATRPLAE AGYYVMPVTL VAEAFKENGM TQATDMHATP VDKLRQIFGA DAALYITIGK YGTVYQVISS ASVVSAEAKL VDLKTGKLLW TGAASASSEE GRSQQQGGLA GLLITAIIKQ VMATALDQSH QVAGVATTRL LSAGTANGML YGPRSPNYDK N
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