Gene Rfer_3560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3560 
Symbol 
ID3961152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3960269 
End bp3960934 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content58% 
IMG OID637918375 
Producthypothetical protein 
Protein accessionYP_524795 
Protein GI89902324 
COG category[S] Function unknown 
COG ID[COG4380] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0259131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTGGA AAAAATATTT TAAAGTACTG GCTGTGACCG CCAGCTTCCT CGTGATGACG 
GGATGCGCGA CCAAAGCACC ACCTTTCGAT TACACCGCGT ACAAGGAAAG CCGTCCACGC
TCCATTTTGA TCTTGCCGCC GGTGAACAAC ACACCTGAAG TGCAGGCCTC GTACAGCGTG
CTGTCCCATG CCACCCGACC ACTTGCCGAG GCCGGCTACT ACGTGATGCC CGTAACCTTG
GTGGCCGAAG CCTTCAAGGA AAACGGGATG ACGCAAGCAA CTGATATGCA CGCGACGCCG
GTCGACAAGT TGCGCCAGAT ATTTGGCGCG GATGCGGCCC TGTACATCAC AATCGGCAAG
TACGGAACGG TGTACCAGGT GATCAGCAGT GCCTCGGTCG TCTCGGCCGA AGCCAAGTTG
GTGGACTTGA AAACCGGCAA GTTGCTGTGG ACCGGCGCCG CTTCTGCCTC CAGCGAAGAG
GGGCGAAGCC AGCAGCAAGG GGGATTGGCC GGGTTGTTGA TTACGGCCAT CATCAAACAG
GTGATGGCGA CTGCGCTGGA TCAAAGTCAT CAGGTTGCGG GCGTTGCCAC TACGCGCCTG
TTGTCGGCAG GTACGGCCAA CGGTATGTTG TACGGGCCAC GCTCGCCGAA CTACGACAAA
AACTAG
 
Protein sequence
MNWKKYFKVL AVTASFLVMT GCATKAPPFD YTAYKESRPR SILILPPVNN TPEVQASYSV 
LSHATRPLAE AGYYVMPVTL VAEAFKENGM TQATDMHATP VDKLRQIFGA DAALYITIGK
YGTVYQVISS ASVVSAEAKL VDLKTGKLLW TGAASASSEE GRSQQQGGLA GLLITAIIKQ
VMATALDQSH QVAGVATTRL LSAGTANGML YGPRSPNYDK N