Gene Rfer_3549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3549 
Symbol 
ID3961141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3948374 
End bp3949093 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content61% 
IMG OID637918365 
Productcyclic nucleotide-binding domain-containing protein 
Protein accessionYP_524785 
Protein GI89902314 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTGC CGCGGGGCCC CACTCAAAAC CACCTTCTCG CGGCCCTGCC GGCCGCTGAG 
TTGGAGCGCA TCGCGCCCCA ATTGGAGTTG GTTCCCATGT TGCTGGGCGA CGTGCTTTGT
GAATCCGGTG GCCAGTTGCA GCACGTCTAT TTTCCAGCCA CGGCCATTGT GTCGCTCCAA
TACACGACGG AGGATGGCGG CTCGGCCGAG ATCGCGGGGG TGGGCAATGA GGGCATGCTC
GGCGTTTCGC TGTTCCTGGG CGGCAACAGC ACGCCCCACT GCGCCACGGT GCAGACGGGT
GGTAGCGGTT ACCGGCTGAA AACGCACTTG CTGCTGGAAG AATTCAATCG GGCTGGCCCG
ATGATGCGTT TGCTGCTGCG CTACACCCAG GCCTTGATGA CGCAGATGTC CCAAACCGCA
GTCTGCAATC GGCACCATTC GGTGGAGCAA CAGTTGTGCC GCTGGCTGTT GGCAACGCTG
GATCGTTTGC CCTCGACTGA GCTGACCATG ACGCAGGAAT TGATTGCCAG CATGATCGGC
GTTCGCCGTG AAGGCATCAC CGCCGCTGCC GGGCACTTGC AGCAAGCGCA GTGCATTCGC
TACCGCCGCG GCCACATCAC GGTGCTTGAC CGCCAGGGCT TGGAGTCGCG CGTGTGTGAA
TGCTACGGCG TGGTGAAAAA TGAATACGAT CGTTTGCTGG GCGATGTTCG CCAGCGCTAA
 
Protein sequence
MDLPRGPTQN HLLAALPAAE LERIAPQLEL VPMLLGDVLC ESGGQLQHVY FPATAIVSLQ 
YTTEDGGSAE IAGVGNEGML GVSLFLGGNS TPHCATVQTG GSGYRLKTHL LLEEFNRAGP
MMRLLLRYTQ ALMTQMSQTA VCNRHHSVEQ QLCRWLLATL DRLPSTELTM TQELIASMIG
VRREGITAAA GHLQQAQCIR YRRGHITVLD RQGLESRVCE CYGVVKNEYD RLLGDVRQR