| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3540 |
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| Symbol | |
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| ID | 3960407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3936317 |
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| End bp | 3937246 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637918356 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_524776 |
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| Protein GI | 89902305 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.740436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTTT TTCTTGAAAC CCTGCTCGGT GGCCTGATGG CCGGCATGTT GTATTCGCTG
GTGGCGCTTG GCTTTGTGCT GATCTACAAG GCTTCAGGCG TCTTCAACTT TGCCCAGGGC
GCCATGGTGC TGTTTGCAGC GCTGGCGATG GCGCGATTTT CTGAGTGGAT TCCGGGCTGG
ACCGGTATCG ACAATCGGAT TGCTGTCAAC CTTGCCGCCT TCTTGCTCGC GGGCATGGTG
ATGTTTGTCG TCGCCTGGCT GATTGAACGA CTGGCGCTAC GCCACCTGGT CAACCAAGAG
GGCACCACCT TGCTGATGGC CACTTTAGGT ATTGGCTATT TCCTCGATGG CATCGGGCAG
ACCCTTTTTG GCAGCAATAT TTACGAAATT AACATTGGCA TGCCAAAAGA CCCGATGCTG
GCGTTTGAAA GCGTCTTTGA GGGCGGCATC CTGATCAACA AGGAAGACCT TTACGCCGCC
CTGATTGCCG CCGTGCTGGT CGCCATGCTG AGCTTGTTCT TCCAGAAAAC AAGCACTGGG
CGGGCACTGC GAGCAGTCGC TGATGATCAT CAGGCGGCGC AAAGTATTGG CATCCCGCTT
AACCGCATCT GGTTCATTGT CTGGTGTGTC GCCGGCGTGG TCGCCTTGGT GGCCGGTGTG
ATCTGGGGCA GCAAGCTGGG CGTGCAGTTT TCGCTCACGA CGGTGGCACT GCGGGCCTTG
CCGGTGGTGA TTCTGGGTGG TCTGACCTCG GTGCCGGGTG CCATTATTGG CGGGCTCATC
ATTGGCGTCG GTGAAAAAAT GTCCGAGGTA TTTGTAGGAC CTTACGTCGG TGGTGGCATC
GAAATCTGGT TTGCCTACGT GCTGGCCCTG GTGTTTCTGC TGTTCCGGCC GCAAGGGCTG
TTTGGTGAAA AGATCATTGA CCGCGTGTAA
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| Protein sequence | MAFFLETLLG GLMAGMLYSL VALGFVLIYK ASGVFNFAQG AMVLFAALAM ARFSEWIPGW
TGIDNRIAVN LAAFLLAGMV MFVVAWLIER LALRHLVNQE GTTLLMATLG IGYFLDGIGQ
TLFGSNIYEI NIGMPKDPML AFESVFEGGI LINKEDLYAA LIAAVLVAML SLFFQKTSTG
RALRAVADDH QAAQSIGIPL NRIWFIVWCV AGVVALVAGV IWGSKLGVQF SLTTVALRAL
PVVILGGLTS VPGAIIGGLI IGVGEKMSEV FVGPYVGGGI EIWFAYVLAL VFLLFRPQGL
FGEKIIDRV
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