| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3539 |
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| Symbol | |
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| ID | 3960406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3935217 |
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| End bp | 3936293 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637918355 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_524775 |
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| Protein GI | 89902304 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.17747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTACA GAGAAAACGG CCAGTTCAAG ACAACTTATC GCGCTGATCA GCAGATATTC
CCGATTGCGC AAGATCGCTG GGCGGTGTTG CTGCTCATCG CAGCGGCGTT CATCGTCGTT
CCAATGCTGA GCAGTGGCTA CATGTTTCGG GCGATTTTGA TTCCTTTCTT GATCATGTCG
CTGGCCGCCT TGGGGGTGAA TATCCTGGTT GGCTACTGTG GGCAAATTTC ATTGGGCTCG
GGTGCCTTCA TGGCGGTGGG TGCCTACGCG GCCTTCAATT TCTTTGTGCG TGTGCCCGGT
ATGCCGCTGC TGCTTGCACT CATTCTCGGC GGCCTGTGTG CCAGCGCTTT CGGCATCCTG
TTCGGTCTAC CCAGCTTGCG CGTGAAGGGG CTCTATCTGG CAGTGGCGAC ACTGGCCGCG
CAGTTTTTTA GTGACTGGAT GTTCCTGCGC ATCAAGTGGT TTACCAATGA CGCACCATCC
GGGTCGGTAT CGGTGGCGGG CTTGCAGGTG TTCGGTATTC CAATTGAGAG TCCGACCTCC
AAGTATCTTT TTTGTCTGAC CATTTTGGTG GTGCTGGCGC TGTTGGCCAA GAACCTGGTG
CGCAGTGCCG TTGGCCGGGA GTGGATGGCG ATTCGCGATA TGGATGTGGC CGCTGCGGTG
ATTGGCATCC GTCCCATGTA TGCCAAGCTC AGCGCTTTTG CGGTCAGCTC GTTCATTATT
GGCGTGGCCG GTGCGCTGTG GGGCTTTGTC TATCTGAGTG CCTGGGAGCC TGCCGCATTC
TCGGTGGACC TGTCGTTCAA GTTGCTGTTC ATGGTCATCA TCGGTGGCAT GGGCTCCATC
ATGGGCAGTT TTTTTGGCGC TGCCTTTATC GTGATTTTGC CGATCTTCTT GAACCAGTTT
CTGCCTTTTT TGGGGCGTGC AGTTGGTGTT CCGATTTCAA CCGTTGTGAC CTCGCATGCT
GAGTTGATCG TGTTTGGCTC CTTGATTGTG TGGTTTCTGA TCGTCGAACC CCATGGTCTG
GCCAAGTTAT GGTCAATTGG CAAGCAAAAA CTGCGCTTAT GGCCATTTCC CCACTAA
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| Protein sequence | MFYRENGQFK TTYRADQQIF PIAQDRWAVL LLIAAAFIVV PMLSSGYMFR AILIPFLIMS
LAALGVNILV GYCGQISLGS GAFMAVGAYA AFNFFVRVPG MPLLLALILG GLCASAFGIL
FGLPSLRVKG LYLAVATLAA QFFSDWMFLR IKWFTNDAPS GSVSVAGLQV FGIPIESPTS
KYLFCLTILV VLALLAKNLV RSAVGREWMA IRDMDVAAAV IGIRPMYAKL SAFAVSSFII
GVAGALWGFV YLSAWEPAAF SVDLSFKLLF MVIIGGMGSI MGSFFGAAFI VILPIFLNQF
LPFLGRAVGV PISTVVTSHA ELIVFGSLIV WFLIVEPHGL AKLWSIGKQK LRLWPFPH
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