Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3534 |
Symbol | |
ID | 3960401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3930083 |
End bp | 3931165 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637918350 |
Product | putative zinc protease protein |
Protein accession | YP_524770 |
Protein GI | 89902299 |
COG category | [R] General function prediction only |
COG ID | [COG4324] Predicted aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCACCC TCCGAACCTT GGTCCTCCTG ACCTTCATCC CCTGGCTAGC CAGTTGCGCC GACACGGGCT ACTACCTGCA ATCCGTTGGC GGCCATCTGC GAATGATGAC GGCGGCTCGA CCGATCGCGA CGTGGCTGGC TGATGAGAGT GTTGCGCCGG CCTTGAAGCA GCGCCTGATG CTGGCCGAGC GCATTCGTCG CTTTGCCGTG ACCGATCTGC AACTTCCCGA CAACGCCAGT TACCAGCGTT ATGCCGACTT GCGGCGCCGC TCCGTGGTGT GGAACGTGGT GGCGGCGCCT GCGTTTTCAT TGACGCTCAA GACCTGGTGT TTCCCGGTGG CGGGCTGTGT CGGTTACCGT GGTTATTTCA ACGAGGACGA GGCGCATGCC GAGGCGCTTG CGCTGCAGCG CGAAGGGCTG GAAACCAGTG TGTATGGCGT CCCGGCCTAC TCGACTTTGG GCTGGCTGAA CTGGGCCGGT GGCGATCCGC TGCTCAATAC CTTCATCCAC TACCCGGAGG GGGAGTTGGC GCGCATGATT TTTCATGAGC TGGCCCATCA GGTGTTGTAT GTCAAGGGCG ACACCCTGTT CAACGAGTCT TTTGCCACGG CGGTTGAACG TCTGGGCGGG GAGCGCTGGC TCTCGGTGCA TGGCTCGGCG TTGGCCCGCA AAGAATATGC CGAGTTTGAC GCCCGGCGCA GGCAGTTGCG GGCGCTGTCG CGCGCAACGC GCACCCGGTT GGATGAAATC TATAAACAAA ACAAGCCTCC AGCCACCGTC ACTATTGAAC AAGTAGCTAT GAAAAAGGCA GCAATGCAGA ATTTCCGCGA TGACTACGCC CGGCTCAGAA GCAGCTGGGG TGGTTACGCT GGCTATGACG CCTGGGTTGC GAGCGCCAAC AACGCGGCGT TTGCCGCTCA GGCGGCGTAT GACGAACTGG TGCCGGCATT TGAGACTTTG TTTGAGCGCC AGGGCCGGGA CTGGCAACGG TTTTATGATG CAGTGCGGCA GTTGGCGAAA ATGCCGGCGG CTGAGCGGAC CCGAGTCCTG GAACAAACAA CAACGGAGCA CCTCAGTGGC TGA
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Protein sequence | MRTLRTLVLL TFIPWLASCA DTGYYLQSVG GHLRMMTAAR PIATWLADES VAPALKQRLM LAERIRRFAV TDLQLPDNAS YQRYADLRRR SVVWNVVAAP AFSLTLKTWC FPVAGCVGYR GYFNEDEAHA EALALQREGL ETSVYGVPAY STLGWLNWAG GDPLLNTFIH YPEGELARMI FHELAHQVLY VKGDTLFNES FATAVERLGG ERWLSVHGSA LARKEYAEFD ARRRQLRALS RATRTRLDEI YKQNKPPATV TIEQVAMKKA AMQNFRDDYA RLRSSWGGYA GYDAWVASAN NAAFAAQAAY DELVPAFETL FERQGRDWQR FYDAVRQLAK MPAAERTRVL EQTTTEHLSG
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