| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3528 |
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| Symbol | |
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| ID | 3960395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3924930 |
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| End bp | 3926192 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637918344 |
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| Product | patatin |
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| Protein accession | YP_524764 |
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| Protein GI | 89902293 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.372261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGA AAACATCTCG CCCGCCAAGA ATTGCGCTGG CACTGGCGGG TGGCGGTCCG
CTGGGTGCCA TTTATGAGAT CGGCGCCCTG TGTGCGCTTC AGGAGTCACT CAACGGCATC
GACTTCACCA AGTTGCAGCA CTATGTTGGC GTGTCCGCTG GGGGCTTCAT AGCCGCCGGT
TTGGCCAATG GCATCACTCC CCATGAGCTG TGTGCGTCAT TTATTGAGAA TGACAGCGAG
ACGTCCGACA GGTCCGAAAC GTTTGATCCG TCCTGGCTGC TGGAGCCCGC CTATGGCGAG
TTTGTGCGCC GCGGCATCAT GCTGCCCGGT TTGCTGCTGT CGGCCTTGTG GCATTTCACG
GCGGGCAGGA AATCGTTCAT CCGGGCACTG GAACGCCTGA GCCCCGGCCT GCCCACCGGC
ATTTTCTCCA ATGAGCAGAT CCATGTTGAG CTGGCCCGCA TCTACGCGCG CGAGGGCCGC
ACCAACGACT TTCGCCAGCT CAAAACCGAG CTCACCCTGG TGGCCACCAA TCTGGACAGC
AGCGTAGCGG TGCCCTTTGG TCGCCCGGGC TGGGACCATG TGCCGATCTC CAAAGCGGTG
CAGGCCAGCG CGGCGCTGCC GGGCCTGTTT CCTCCGGTGG AAATTGATGA CAGCTACTAT
GTTGACGGCG CCCTGAAAAA GACCATGCAC GCCTCCGTTG CCCTGGCCAG CGGCGTTGAC
CTGATGTTGT GCCTGAACCC ATTGGTGCCG TTTGATGCCA CCGCACCACA GGTCGCCAAA
GTCATGCGGC GTGGCCTGCC AGCTGAAAAG CACCACATCC CGCGCATCAT CGACGGCGGA
CTGCCCGCGG TGCTGAGCCA GACCTTTCGC TCCATGATTC ATTCACGCCT GAGCCTGGGC
ATGAAGCACT ACGAGCACCT CTACCCCAAC ACCGACATCA TCCTGATTGA GCCCGACCAC
CGGGACCCGG AGATGTACCT GGCCAATACC TTCAGCTACT CCCAGCGCCG CAACCTGGCC
GAGCACGCTT ATCAGCAGAC ACGCCAGATG CTGCGCTCCA ACAAAACCGG CCTGTCCGAG
AAACTGCGGC GTCACGGCAT CAGCCTGCAC CACGAATCGC TGGACGACCC CAAGCGGCAC
TTGAGTGCGC CGGCCAAGCC CGCCAGCCAG GTGGGGCGCG CCATCGCGAA TCTGCAGGAA
ATCATGGACG ATCTGGGCCA TGTCGTGCGA TCAGCAGCGC ATAAGAGCAG CCCCTCATGG
TAA
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| Protein sequence | MKLKTSRPPR IALALAGGGP LGAIYEIGAL CALQESLNGI DFTKLQHYVG VSAGGFIAAG
LANGITPHEL CASFIENDSE TSDRSETFDP SWLLEPAYGE FVRRGIMLPG LLLSALWHFT
AGRKSFIRAL ERLSPGLPTG IFSNEQIHVE LARIYAREGR TNDFRQLKTE LTLVATNLDS
SVAVPFGRPG WDHVPISKAV QASAALPGLF PPVEIDDSYY VDGALKKTMH ASVALASGVD
LMLCLNPLVP FDATAPQVAK VMRRGLPAEK HHIPRIIDGG LPAVLSQTFR SMIHSRLSLG
MKHYEHLYPN TDIILIEPDH RDPEMYLANT FSYSQRRNLA EHAYQQTRQM LRSNKTGLSE
KLRRHGISLH HESLDDPKRH LSAPAKPASQ VGRAIANLQE IMDDLGHVVR SAAHKSSPSW
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