Gene Rfer_3525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3525 
Symbol 
ID3960392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3921153 
End bp3921524 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content56% 
IMG OID637918341 
Producthistone-like nucleoid-structuring protein H-NS 
Protein accessionYP_524761 
Protein GI89902290 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.698098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATT TGATCGAGAT TCAAAGTCAG ATAGAGAAAC TGCAAAAGCA GGCCAGTGAT 
ATCAAAGCAC GGGAGTTTGG CAAGACGGTG CAGGATATTT TGGCCAAGAT GCAGGCTTTT
GGTATCACCC TGAAGGATTT GCAGCCTGGC AAGGCACGCG GGGCCAAGGG CAAAGCCAAA
GCCACCAAGG TCGGCAAGGC CGGTGCTGGC GTCAAACCCG CTGGCGCCCC CAAGAAAGTC
GCCTTGCCGG TGGCTGCCAA ATACCGGGGT CCCAATGGGG AAGGCTGGAG TGGCCGGGGT
TTGACGCCGC GCTGGTTGAC AGCGCTGCTG GTGGATGGAA AAACCAAAGA AGATTTCGCG
ATCAAGAGTT GA
 
Protein sequence
MSDLIEIQSQ IEKLQKQASD IKAREFGKTV QDILAKMQAF GITLKDLQPG KARGAKGKAK 
ATKVGKAGAG VKPAGAPKKV ALPVAAKYRG PNGEGWSGRG LTPRWLTALL VDGKTKEDFA
IKS