| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3487 |
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| Symbol | |
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| ID | 3963206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3878546 |
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| End bp | 3879898 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918304 |
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| Product | fumarate lyase |
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| Protein accession | YP_524724 |
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| Protein GI | 89902253 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTCCA CCATCATTGA CTCCCGGATT TTTGGCGACA TGTTCAGCGA TGCCCGCATG
CGCCAGGTCT GGTCGGACGA AAACCGAACC GCCAAATACC TTGACATCGA GCGCGCCTTG
GCCAAGGTGC AGGGCGAGCT GGGCATCATC CCCAAAGAGG CCGCGGACGA GATCGTCCAA
CACTGCGAGC TGTCCATGAT CGACTGGGAC AAGCTCAAAG CCAAGACAGA GCAGATTGGC
TACCCCATCA TTGCCGTGGT GAACCAGATC AACACCAATT GCCGCGACGG CCTGGGCGAA
TACTGCCACT GGGGTGCCAC CACGCAAGAC ATCACCGACA CGGCCACCGT GCTGCAAATG
CGCGAAGGCC TGGCCCTGGT CGAGCAGGAC CTGGCCGACA TTTCGGACGC GCTGGCCACA
CTGGCCAAGA AGTACCGCGA CACGCCCATC ATTGGCCGCA GCAACCTGCA ACAGTCCACA
CCCATCACCT TTGGCTACAA GATGGCCAGT ATCCTGGCCG GCATCGAGCG CCACCGCGAG
CGCCTGAGCC AGCTCAAACC CCGTGTGCTG ATGGGTGAGT TTGGCGGTGC CTCCGGCACA
CTCTCTTCGC TGGAAAAAGG TGCCATGGAA ACCCAGGCCG GCCTGATGAA AGAGCTGGGT
CTGGCGCAGC CGCTGATCTC CTGGCACACG GTGCGCGACA CCATTGCCGA AGTCGGTGCC
TTCCTCGGCC TGGTGGGCGG CTCACTCGGC AAGATCGCGA TGGACGTGAA GCTGATGATG
CAGACCGAAG TGGGCGAGGT GTTTGAGCCC TATGCCCCTG GCCGTGGTTC GTCTTCCACC
ATGCCGCAAA AGCGCAACCC GATCTCCTGC CTGTATATCC ACGCCAACGT GTCGGTGGCA
CGCCAGCACG CTGCGGCCTT GATGGATGCC ATGGTGGCCG ACCATGAGCG CTCCACCGGC
CCCTGGGAAA TTGAATGGGT GTCGCTGCCG GAAATCTTCT GCCTGATGTC GGGCGCGTTG
AAACAAACCA AGTTTGTGCT GCAAGGCCTG GAGGTGGATG CGGTGCGCAT GCGCGCCAAC
ATGGACATCA CCAACGGGCT GGTCATGTCC GAGGCGGTGA TGATGGGACT GGGCCCGTAC
ATTGGCCGCG AATACGCTCA CGACCTGGTG TACGACCTGT GCCGCCAGGC ATTAAAAGAG
CATCGCCCGC TGATCGACAT TCTGGAAGCC CACCCCGAGA TCAACAAACA CGTGACCCGT
GTCCAGCTCG AAGCCATGTG CGACCCTATC AACCACCTCG GCCAGGCCGG TGTGATGGTG
GACCGTGTGC TGGCGGCGCG CCAGGGAGTT TGA
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| Protein sequence | MASTIIDSRI FGDMFSDARM RQVWSDENRT AKYLDIERAL AKVQGELGII PKEAADEIVQ
HCELSMIDWD KLKAKTEQIG YPIIAVVNQI NTNCRDGLGE YCHWGATTQD ITDTATVLQM
REGLALVEQD LADISDALAT LAKKYRDTPI IGRSNLQQST PITFGYKMAS ILAGIERHRE
RLSQLKPRVL MGEFGGASGT LSSLEKGAME TQAGLMKELG LAQPLISWHT VRDTIAEVGA
FLGLVGGSLG KIAMDVKLMM QTEVGEVFEP YAPGRGSSST MPQKRNPISC LYIHANVSVA
RQHAAALMDA MVADHERSTG PWEIEWVSLP EIFCLMSGAL KQTKFVLQGL EVDAVRMRAN
MDITNGLVMS EAVMMGLGPY IGREYAHDLV YDLCRQALKE HRPLIDILEA HPEINKHVTR
VQLEAMCDPI NHLGQAGVMV DRVLAARQGV
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