| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3454 |
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| Symbol | |
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| ID | 3962561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3843318 |
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| End bp | 3845189 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637918272 |
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| Product | histidine kinase |
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| Protein accession | YP_524692 |
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| Protein GI | 89902221 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACCCC ATCAAACAAA GCTACTCAGC CGCGTTGGCC TGTTTCTGGG TTTTGTGACC
CTCATCGCCG GAGCCAGCCT GTTCGCCTTC CGCTTCAGCT TGGCCATGGG CCTGGCCGAG
TTGCAGGTCA CCGGGCGCCA CCGGTTGGAC CTGTACGCCA CCAGCCTGGA GCGGGAAATC
GACAAGTACG CCTACTTTTC CACCACCCTG GGTCTGGAGC GGGACGTGCT GCAAATGCTG
GCCGCACCCC ACCCGACCCG GACGGCGCAG GTGAACCAAT ACCTGGAACA GCTCAACGAG
CGGGCTGGCA CCCTCTCGAT CTACGTGCTG GACAGCAAGG GCAAAGTCCT GGCCACCAGC
AACTGGCGCC GGCCCGACAG CTTTCTTGGG GAGGATCTCT CTTTTCGTCC CTATTTTCGC
CAGGCCATGG AGACCGGCAG CGGGCGCATC TTTGGCATCG GCACCACCCG GGGCGAGCCC
GGATACTACC TGGCCTCGTC CTTGACCAAT GGCCAGGGCA CGGTAGGCGT GGCCGTGGTC
AAGGTGGGCC TGCAACAACT GGAAAAATCC TGGGTCACGG CGGAAGCGCC GGTCCTGGTC
GCCGATGAGA ACGGCGTGGT CATCCTAGCC TCGGTGCGGG ACTGGAAGTT CACCACCCTG
ACACCCCTGG ACGAAGCCAC CCGCCGCGCC TTTGACCGCA CCCAGCAATA CAACCGCCGC
GCCCTCAATC CCTTGGGCGT GGTGGAAATG ACGGCACTGG AGCACGGCGC CCGCCTGGTG
TCCCTGCCCA AGCTGGGGCC GGAGATGGTC TCCATGTTTC CCGTCGCCGG CAAGTTCCTG
GCCCAGACCC AGCCGCTGCC CGGCAGCCCC TGGAGCATCA CGGTCTTCTC CCTGCAGGAG
CAGGTGCGTG GCATGGCAGC CAACCGGGCG GCCGTGGCTG GCGTGGGCGC AGCCTTCCTG
TGCATCCTGA CGCTGATGCT GAACGAGCGG CGACGCCATC TGAAAGACCG GCTGGCGGCC
CGGGAGGCGC TCCAGCAAGC GCACGACGAA CTCGAACGCA AGGTAGTGGA GCGCACCGCC
GACCTCTCTG CCGCCAACAC CCGCTTGCAA GTGGAGGTGG CAGAACGCAC CCGGGCCGAG
CGCACCTTGC GTGCCGCTCA AGACGAGCTG GTCCAGGCCG GCAAGCTGGC CGTTATCGGC
CAGCTCTCCT CCGGCATCGC CCACGAGCTG AATCAACCGC TGGCGGCGCT ACGCACCCTC
TCCGGCAATG CCCGCAAGTT CCTCGCCCGC GGTGACCAGC AGACCGCTGA CAGCAACCTG
AATCGCATCG CCGACCTGGT GGATCGGATG GGCCGCCTCA CGGGCCAGTT GAAATCCTTC
GCCCGCAAGT CCTCGGGCCG CCCCCAGGTC GTACCGCTGC GCCGGGCCGT GGATAACGCC
CTGTTCCTGT TGGAGCAGCG CTTGAGGCGC GCTGGCGTCG TGGCCTGCAT CGATCTGTCG
GACGAAGAGC TGCAAGCCTG GTGCGATGCC AACCGGCTGG AGCAGGTGCT GGTGAATCTG
GCCGGGAACG CCCTGGACGC CATGGAAGGC CAGCCGGCAC AAGCGCTCGA CATCACCGCC
CGGCGCCAGG GCGAGCGGAT TCTGATCCAG GTGCGGGACC GAGGGCCGGG CCTGTCCGCG
CAAGCACGAA CACACCTGTT CGAACCGTTT TTCACGACCA AGGAGGCAGG CAGTGGCCTG
GGACTCGGCT TGACCATCTC TGCCGGTATC GTCGCCGATT TTGGCGGCAG CCTGTCTGGC
GACAATCATC CAGAAGGCGG CGCCATCTTC ACGCTGGACA TTCCAGCCGC CCCAGGAGGG
CCAACAACAT GA
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| Protein sequence | MSPHQTKLLS RVGLFLGFVT LIAGASLFAF RFSLAMGLAE LQVTGRHRLD LYATSLEREI
DKYAYFSTTL GLERDVLQML AAPHPTRTAQ VNQYLEQLNE RAGTLSIYVL DSKGKVLATS
NWRRPDSFLG EDLSFRPYFR QAMETGSGRI FGIGTTRGEP GYYLASSLTN GQGTVGVAVV
KVGLQQLEKS WVTAEAPVLV ADENGVVILA SVRDWKFTTL TPLDEATRRA FDRTQQYNRR
ALNPLGVVEM TALEHGARLV SLPKLGPEMV SMFPVAGKFL AQTQPLPGSP WSITVFSLQE
QVRGMAANRA AVAGVGAAFL CILTLMLNER RRHLKDRLAA REALQQAHDE LERKVVERTA
DLSAANTRLQ VEVAERTRAE RTLRAAQDEL VQAGKLAVIG QLSSGIAHEL NQPLAALRTL
SGNARKFLAR GDQQTADSNL NRIADLVDRM GRLTGQLKSF ARKSSGRPQV VPLRRAVDNA
LFLLEQRLRR AGVVACIDLS DEELQAWCDA NRLEQVLVNL AGNALDAMEG QPAQALDITA
RRQGERILIQ VRDRGPGLSA QARTHLFEPF FTTKEAGSGL GLGLTISAGI VADFGGSLSG
DNHPEGGAIF TLDIPAAPGG PTT
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