| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3446 |
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| Symbol | |
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| ID | 3960506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3834954 |
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| End bp | 3836642 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637918266 |
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| Product | beta-lactamase-like |
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| Protein accession | YP_524686 |
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| Protein GI | 89902215 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGCC CCTCCCAACT CCTGCACCCC GCGCGCCCAC CCGCGCCCAC CCGCCCGGCC
GCGACCGTGC TGTTGCTGCG CGACACACCC GGTGGGCTCG AAGTGCTGAT GACACGCCGC
TCCACAACAG CCAGTTTTGT GCCGGGCGCC TACGTCTTCC CCGGTGGCGG CGTGGACGCG
CTCGACAGCG CCAGCCACGC CCAGGCCAGG CGCCGCGAGA CACAGAGCGA CCTGCACCTG
ACGCAGGCGA TTGCCGCCAT CCGCGAGAGT TTTGAGGAGC TGGGGGTGCT GCTGGCGCGC
CGCTCTGATG GCAGCCCCGC CAACCAGCAC GACATCGATG CGCTGGACCG AGGCGCGCCC
TTTGTCGCTC AATGTCAAAG CCGATGCCTG ACGCTGGCGG CCGACGAGGT GTTTGTGCTG
GCGCACTGGA TCACCGACCG CGACCTGCCG CGCCGCTTTG ACGTGCCGTT TCTGGTCGCC
CGCATGCCCG AGGGGCAAAC GCCAGTCGCG GACGAGAGCG AGCAGTTCGA GCCGGTCTGG
GTGCGCCCCG TTGACGCGCT GGCGCGGCAT GAGGCGGGCC AGTTCTTCAT CATCTACCCG
ACCATCCGCA CACTGGAGCG GCTGCTGCAC TACGCCAGCG TGGACGCAGT GCTGCAAGCC
TGCGCCGTCA ACGAGCGGCC GCTCTGGACT TGCTGCCCGC GCGCCGGTCT GCTGGGCGGG
TGCGAGGTCC GCTTCATGGA GCATGAGCTC CCCTTTGGCG AACTGGCGCT GGTCTGCCCG
GATGGGCAAG TCGTGCACCC GTTGGACTGG CAGACCGAGC AGCCGGTGGC ACTCTTGAAG
AACGTGCTGC GCCTGACCGC GCCCAACCCT GGCGCCATGA CCGGGCCCGG CACCAACAGC
TATCTGGTGG GCGACCCGGC GACCGGTTAC CTCGTGATCG ACCCCGGTCC GGCCGACCCG
GATCACCTTG AAAAACTGTG GCGTGCGGCC GGCGGTGACA TCCGCATGAT TGTGTGCACC
CATTCGCACC CGGACCACGC CCCGGGCGCC CTGCCCTTGC AGGCGCTGTG CCTGCAGCAC
GGCCAGCCGC GGCCACCGAT TCTGGGTCTG CCCAGCGCGC CGACGGCCCG CGCCCACAGT
GTATTCACGC CCAACAGAAC ACTATTGAAT AGTGAGCTGC TCACGCTTAT TCCACGGGGG
TCAGAGGCTG ATTTGTCATA TATTTCAGGC CACACGCTCA AGGTGATTCA TACCCCCGGC
CACGCCGCCA ACCACCTGTG CCTGGTCTTG CTGGAAGACC GTTTGCTGTT CAGCGGCGAC
CACATCCTGA GCGGCAGCAC CACGGTGATT GATCCGCCCG ATGGCGACAT GCAGGCTTAT
CTGGACTCCC TGGACGTGTT GAGCGCCGCC TGCGAAGAAC ACCAGCTCGA ATTCATCCTG
CCCGCCCATG GCTACGTGAT TGGCGGTTTT GACGGCGAGG CAGCCGGGGC CATTACGCGT
CTGAAAGCCC ATCGCCTGCA GCGCGAAGCC AAAATCGTGC AGGCGATGCA GGCACAACCG
CAAGGCACAC TGGACGACTG GGTCGCGCAG GTCTACGACG ACGTCCCGCC GCGCATGTGG
CCGGTGGCCA AGCGCTCGCT CATGGCCCAT GTGGCGCGCA TTGAAGTCAA TTTATCCCTG
AATGACTGA
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| Protein sequence | MPRPSQLLHP ARPPAPTRPA ATVLLLRDTP GGLEVLMTRR STTASFVPGA YVFPGGGVDA
LDSASHAQAR RRETQSDLHL TQAIAAIRES FEELGVLLAR RSDGSPANQH DIDALDRGAP
FVAQCQSRCL TLAADEVFVL AHWITDRDLP RRFDVPFLVA RMPEGQTPVA DESEQFEPVW
VRPVDALARH EAGQFFIIYP TIRTLERLLH YASVDAVLQA CAVNERPLWT CCPRAGLLGG
CEVRFMEHEL PFGELALVCP DGQVVHPLDW QTEQPVALLK NVLRLTAPNP GAMTGPGTNS
YLVGDPATGY LVIDPGPADP DHLEKLWRAA GGDIRMIVCT HSHPDHAPGA LPLQALCLQH
GQPRPPILGL PSAPTARAHS VFTPNRTLLN SELLTLIPRG SEADLSYISG HTLKVIHTPG
HAANHLCLVL LEDRLLFSGD HILSGSTTVI DPPDGDMQAY LDSLDVLSAA CEEHQLEFIL
PAHGYVIGGF DGEAAGAITR LKAHRLQREA KIVQAMQAQP QGTLDDWVAQ VYDDVPPRMW
PVAKRSLMAH VARIEVNLSL ND
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