| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3397 |
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| Symbol | |
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| ID | 3962181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3781276 |
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| End bp | 3782262 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637918217 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_524637 |
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| Protein GI | 89902166 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACTA GCGCCCCCAA ACCCTCGTTG GACCAAACCC TGGACCGTGC CAACAGCGAC
CTCGTGCTGA TCGTGGACGA CGTGCCCGAC AACCTGTCGG TGCTGCATGA CGCGCTGGAC
GAATCCGGTT ACACCGTGCT GGTCGCCACC CATGGCGAGG CTGCCTTGCA GCGCGCCGCG
CAAGCCTTGC CCGATATTGT GTTGCTGGAC GCCATGATGC CCGGCATGGA TGGTTTTGAG
GTGGCGCGGC GCCTGAAAGC CGCGCCGCAA ACCGCGCACA TTCCCATCAT CTTCATGACC
GGCCTGCTGG ACACCGAATA CCTGGTGGCC GCGCTGGAGG CGGGTGGTGT CGACTACGTC
ACCAAACCGA TCAAGCCCAA AGAAGTGCTG GCCCGCATGC AGGTGCACCT GCAAGGCGCG
CGCGAAAAAC GCCAGGCTAG ATCCGCGCTG GACGCCTTTG GCTATGCCAG CATCACCGTG
CGTGTGAGCG ACGGCAAACT GATGTGGCAA ACCCCGCTGG CACGCGAACT GCTGCTGCGC
TACTACGGCA CCGAGGCGCC GAAAACGCCC GAGCCGGTCT GCCAGTGGCT GCGTCGCCAT
GTGAATGATG CCGTGGCGCT GACCGAGCCG CCGCGCCTGA GTATCGAGCT GGGTCCGAAG
CGCCTGACCT TTCGCCTGCA CCAGCAAATC GGTGACTCCG AGGGCGGCGG CGACTGGCTC
ATCATCATGC AGGAGGTGTC GGACGAGAGC GTGATCGAAG CCATCGCCCT GAGCTTCAAG
CTGACACCGC GCGAGGCCGA GGTGCTGTAC TGGGTGGTCA AGGGTAAGAT CAACCGCGAC
ATTGGCGACA TCCTGGGCTC CAGCCCGATG ACGGTCAAGA AACACCTGGA GCATGTGTTT
GCCAAGCTGG GCGTGGAGAC CCGCACGGCG GCGGCCGGCA TGGCGATGAG CCGCATCCGC
CAGCTGCATC CGCAATTTGA AGGATGA
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| Protein sequence | MKTSAPKPSL DQTLDRANSD LVLIVDDVPD NLSVLHDALD ESGYTVLVAT HGEAALQRAA
QALPDIVLLD AMMPGMDGFE VARRLKAAPQ TAHIPIIFMT GLLDTEYLVA ALEAGGVDYV
TKPIKPKEVL ARMQVHLQGA REKRQARSAL DAFGYASITV RVSDGKLMWQ TPLARELLLR
YYGTEAPKTP EPVCQWLRRH VNDAVALTEP PRLSIELGPK RLTFRLHQQI GDSEGGGDWL
IIMQEVSDES VIEAIALSFK LTPREAEVLY WVVKGKINRD IGDILGSSPM TVKKHLEHVF
AKLGVETRTA AAGMAMSRIR QLHPQFEG
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