| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3386 |
|---|
| Symbol | |
|---|
| ID | 3960958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 3762955 |
|---|
| End bp | 3764694 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637918206 |
|---|
| Product | gamma-glutamyltransferase |
|---|
| Protein accession | YP_524626 |
|---|
| Protein GI | 89902155 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0405] Gamma-glutamyltransferase |
|---|
| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACT TGCACTTCGC CTCCAAACTG CAGACATCGC TGTTGGTGAC CGGCATCCTG
CTGGCTGCGC ACAGCGGCTT GCAGGCCGCC TCCGTGGCCC CGGTTGCCGC TGAACACGGC
ATGGTGGTCT CAGCCCAGCA ACTGGCCACC AAGGTCGGCG TCGACGTACT GCGGCGCGGC
GGCAACGCGG TCGATGCGGC GGTGGCCGTG GGCTACGCCC TGGCCGTCGT GTACCCGGCG
GCCGGCAATC TGGGCGGCGG CGGTTTCATG ACGGTGCAAC TGGCCGATGG TCGCAAGACT
TTTCTGGACT TCCGTGAGAA GGCGCCGCTT GCCGCCAGCG CCAACATGTA CCTCGACAAG
GACGGCAACG TGATCAAGGG CCTGAGCACG TATGGTCATC TGGCCGTCGG CGTGCCGGGC
AGCGTGTCGG GCATGGAATA TGCCCGCACG AAATACGGCA CCATGAAGCG CGCCGAACTG
CTCAAGCCCG CCATCACACT GGCGGAAAAG GGCTTTGCCC TGAACCAGGG CGACATCGAC
ATCTTCCATA CCGCCACGGC TGATTTCAGC AAGGACCCGG CCTCGGCGGC CATCTTCCTC
AACAAGGGGC AAGCCTTCCA GGTCGGTCAG AAGCTGGTGC AGAAGGACCT CGCCAAAACC
CTCAAGGCGA TCAGCCAGCG CGGCACCGAT GGTTTCTACA AGGGACCAGT GGCGGCGGCG
ATCGTCAAGT CCAGCCAGAG TGGCGGCGGC ATCTTGACCC AGGCCGACCT GGACCAATAC
AGTGTGCGCG AGATGGCGCC GATCGAATGC GACTACCGTG GCTACCATGT GATCTCGGCG
CCACCGCCCA GTTCTGGCGG CGTGGTCATC TGTGAGATGC TCAATATCCT GGAGGGCTAC
CCGCTGAAAG ACCTGGGCTT TCGCTCGGCC CAGGCGGTGC ACTACCAGAT TGAAGCAATG
CGCCATGCCT ACGTGGACCG CAACAGCTAC CTGGGCGACC CGGATTTTGT GAAGAACCCG
ATCGCACGCC TGACCGACAA GGCCTATGCG GCGCAGATCC GCGCGGTGAT CGACCCCAAC
AAGGCCGGTG TCTCGAAGGA CCTCAAGCCC GGGGTCGAGC CGCATGAAGG CAGCAACACC
ACCCATTATT CGATCGCCGA CCAATGGGGC AATGCGGTCG CCGTCACCTA CACCCTGAAC
GATTGGTTCG GCGCCAAGAT GACCGCGGCA GGCACCGGCG TGCTGCTGAA CGATGAAATG
GACGACTTCA CCTCCAAGCT GGGCGTGCCC AACCTGTACG GCTTGGTTCA GGGCGAGGCC
AACGCCATTG CCCCGGGCAA ACGCCCGCTG TCGTCCATGA GCCCGACGAT TGTGAGCAAG
GACAAGCAGC CCGTGATGGT GTTGGGGACA CCGGGCGGCA GCCGCATCAT CACGGTGGTT
TTGCACACCA TCCTGAACGT GGTCGACTAC GGCATGAACG TGCAGGAAGC GGTCGATGCA
CCACGCTTTC ATCAGCAATG GCTGCCGGAT CTGACCAACG TCGAAAACTT TGCGATCTCG
CCCGATACAC GCAAGTTGCT GGAGGCTGCC GGCCACAAGC TGGGGGCCCC GCAACCGGCC
AACCACATGG CCGCCCTGCT GATTGGCGCA CCTTCACTGG GCGGCAAACC GGTGGGTAAC
AACCGCTTCT ACGGCGCCAA CGATCCGCGC CGCAACAGTG GCCTGGCGAT GGGTTATTGA
|
|---|
| Protein sequence | MKNLHFASKL QTSLLVTGIL LAAHSGLQAA SVAPVAAEHG MVVSAQQLAT KVGVDVLRRG
GNAVDAAVAV GYALAVVYPA AGNLGGGGFM TVQLADGRKT FLDFREKAPL AASANMYLDK
DGNVIKGLST YGHLAVGVPG SVSGMEYART KYGTMKRAEL LKPAITLAEK GFALNQGDID
IFHTATADFS KDPASAAIFL NKGQAFQVGQ KLVQKDLAKT LKAISQRGTD GFYKGPVAAA
IVKSSQSGGG ILTQADLDQY SVREMAPIEC DYRGYHVISA PPPSSGGVVI CEMLNILEGY
PLKDLGFRSA QAVHYQIEAM RHAYVDRNSY LGDPDFVKNP IARLTDKAYA AQIRAVIDPN
KAGVSKDLKP GVEPHEGSNT THYSIADQWG NAVAVTYTLN DWFGAKMTAA GTGVLLNDEM
DDFTSKLGVP NLYGLVQGEA NAIAPGKRPL SSMSPTIVSK DKQPVMVLGT PGGSRIITVV
LHTILNVVDY GMNVQEAVDA PRFHQQWLPD LTNVENFAIS PDTRKLLEAA GHKLGAPQPA
NHMAALLIGA PSLGGKPVGN NRFYGANDPR RNSGLAMGY
|
|---|
| |