| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3354 |
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| Symbol | |
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| ID | 3964217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3724717 |
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| End bp | 3725283 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637918174 |
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| Product | putative thioredoxin-related transmembrane protein |
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| Protein accession | YP_524594 |
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| Protein GI | 89902123 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1225] Peroxiredoxin |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.24257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTGAAT CGCCCCTTTC TTCCGAACTC GCAGAAAACC GCTCAAGGAC CCGTCGGCGC
TGGTTGATGG GTGCGGTGGC CGGTGCCGCC GCTTTGGGAG GCGTTGGCTT GGCTTGGCGG
ACCTACGCGC CGCAGACGAT GCCGCCGGCC GCCGACTCGG GACTTTGGCA ACTGGAGTTC
CCAGGACTCG ATGGTGGCGT GTTCAGTATG GCTTCGTTGC GCGGCAAGCC TGTGCTGTTG
AATTTCTGGG CCACCTGGTG CCCGCCTTGT GTGGAAGAAC TACCGCTATT GAGCAGCTTC
TATCAGGAGC ATTCAGCCAA AGGATGGCAA ATGCTTGGTT TGGCGGTGGA TCAGTTGGAG
CCGGTCAAGC GGTTTTTGGT GAAGACTCCG GTGACTTTTC CAGTCGTGCT GGCAGGAGTT
CCCGGTGTTG AACTCAGCAA ATCGCTCGGT AATTTGAGTG GTGGTTTGCC GTTCACTGTG
GTGCTTGGAT CAGATGGGGT GGTGGCGCAT CGTAAAATAG GTCAAGTGTC GCCGGCGAAT
CTGTTGGCTT GGGCAACATT GAAATAG
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| Protein sequence | MIESPLSSEL AENRSRTRRR WLMGAVAGAA ALGGVGLAWR TYAPQTMPPA ADSGLWQLEF
PGLDGGVFSM ASLRGKPVLL NFWATWCPPC VEELPLLSSF YQEHSAKGWQ MLGLAVDQLE
PVKRFLVKTP VTFPVVLAGV PGVELSKSLG NLSGGLPFTV VLGSDGVVAH RKIGQVSPAN
LLAWATLK
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