Gene Rfer_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3343 
Symbol 
ID3963042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3710578 
End bp3711381 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content62% 
IMG OID637918163 
Productcytochrome c assembly protein 
Protein accessionYP_524583 
Protein GI89902112 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTAG CCAGTGCTTC CCCCTTGAGT CTGACGTTGG CGCTTGGCGC TGCTGTAGCC 
TATGGCGTGT CGGCCTTCGG CGCCGCCCGT CTGGGCACCG GTGTGGCACG GGCTGCAGTC
AGGCTGGGCT GGCTTCTGCA TGGCGTGATG TTGGCCTGGA GCCTGTTCGG TGAGGCGCCC
CGCTTCGGCT TTGCGCCAGC TTTGTCAGTC ACCGCCTGGC TGGTGGCCGC CGTCTACGCC
ATTGAGAGCC GTGTCTATCC ACTGTTGCAA ACGCGCTGGG CCCTGTCCAC GCTCGGCGCC
ATCGTGGTGC TGCTGGCGGC CTTCTTCCCA GGTAATCTGT TGCATGCGAA TGCCTCGCCC
TGGCTGCCGG TGCACTGGGC GCTGGGCATC GCGTCTTATG GTCTATTTGG CACCGCCGTG
GTGCACGCGT GGTTCATGAG CCGCAGCGAA GAGCGCATTC GCCTGGCGGC TGACGCCCAC
ATCGGTATGC CGCTGCTGAC CATGGAGCGC CTGACCTTCA GGTTCGTGAG TGCAGGTTTC
TTGCTGCTGT CGGCAACCTT GGTACTGGGC CTCGTGTTTG AAAAGCAACT TTATGGTTCG
GCGACGCCCC TGAAATGGGA CCACAAGACG GCGTTTTCCG TGCTGTCGTG GCTGATCTTT
GCCGTTTTAC TTATTGGCCG CGCCCGATTT GGCTGGCGTG GCAAGCGCGC GGTACGGGTC
TTGTATATCG GCGCCGGGTT TCTGCTGCTG GCTTACGTGG GCTCGCGCTT CGTCATGGAG
ATTGTGCTCG GACGCGCGCT ATGA
 
Protein sequence
MILASASPLS LTLALGAAVA YGVSAFGAAR LGTGVARAAV RLGWLLHGVM LAWSLFGEAP 
RFGFAPALSV TAWLVAAVYA IESRVYPLLQ TRWALSTLGA IVVLLAAFFP GNLLHANASP
WLPVHWALGI ASYGLFGTAV VHAWFMSRSE ERIRLAADAH IGMPLLTMER LTFRFVSAGF
LLLSATLVLG LVFEKQLYGS ATPLKWDHKT AFSVLSWLIF AVLLIGRARF GWRGKRAVRV
LYIGAGFLLL AYVGSRFVME IVLGRAL