Gene Rfer_3326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3326 
Symbol 
ID3962967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3691148 
End bp3691867 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content60% 
IMG OID637918146 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_524566 
Protein GI89902095 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAC CAATCCTTAC CATCGATGAA CGTGCAGCGA TCAATTCAGG TCGCTGGTTT 
TCAACCCTGT CGCCTTCTTT GCGACACGAT ATTCTGCGAT GCGCTTACGT CAAACGATAC
AAGGACGGCG AACTCATCAC TGCCCGCGGC GAGCCGCCGG AAGAATGGAT TGCCTGCGCG
CGCGGTGCCG TGCGGGTCAG CTCCACATCC ATCTCGGGCA AGCAGATCAC GCTGACCTAT
GTGGAGCCGG GCATCTGGTT CGGCGATGTG GCCATCTTCG ACGGCGACCG ACGCACCCAC
GATGCCTACG CTCACGGCGA GACGACCATC TTGTGTGTCG CCAAGGCCGA TTTCAAAAAG
ATTCTGGCGC ACCATGCCGA GCTCTACGAA GCGCTGCTGC GCCTGCACGC CCGTCGCATC
CGCCAGTTGT ACGGTCTGGT GGAAGACCTC AACACCCTGC CGCTGCGGGC ACGACTGGCC
AAGCAGTTGC TGCACCTGGT GCGCAGCTAC GGCGTGCCCT CGCTCAGCGA TGGGCGCGAA
ATGCGCATCG GCCTGCAATT GGCACAGGAA GAACTGGCGC AATTGCTGGG TGCCTCCCGC
CAACGCGTCA ATCAGGAACT CAAGTCGATG GAGCGAGAGG AAACCATCCG GATCGAACCG
GGTGGTCTGG TCATTCGCAA CCGCGACGCC TTGATGCTGA TCGCAGACGC CGATAACTGA
 
Protein sequence
MEEPILTIDE RAAINSGRWF STLSPSLRHD ILRCAYVKRY KDGELITARG EPPEEWIACA 
RGAVRVSSTS ISGKQITLTY VEPGIWFGDV AIFDGDRRTH DAYAHGETTI LCVAKADFKK
ILAHHAELYE ALLRLHARRI RQLYGLVEDL NTLPLRARLA KQLLHLVRSY GVPSLSDGRE
MRIGLQLAQE ELAQLLGASR QRVNQELKSM EREETIRIEP GGLVIRNRDA LMLIADADN