| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3315 |
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| Symbol | |
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| ID | 3962956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3680291 |
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| End bp | 3682711 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637918135 |
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| Product | putative ATP-dependent protease La, putative |
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| Protein accession | YP_524555 |
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| Protein GI | 89902084 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATTT CCAGTCTGCC GCCCGATGTG CTTCGCGTCA CGGTCGCTCC CGAGTCCCTC
GGGTTCTCTG ATACCTCCGA GTTATTGCAA CTCCCGCTGC CCTGGATCGG GCAGGAGCGC
GCCGAAATCG CCGCGCGCTT CGGCCTTGGC ATGGAACAGC TCGACTACAA CCTGTTTGTT
CTGGGTGAGG TCGGCAGCGG ACGCTCCACC TTGTTGCGCC AGGTGATGCA GGAGGTGGCG
GCCCATCGGG CGGCGCCGCC CGACTTGTGC TACCTGCACA ACTTCGATGC GCCGGACAAG
CCCCGTGCCC TGCGCCTGCC ACCGGGGCAG GGACGTTTGC TGCGCCAGTT CATGGCCCAA
ATGTGCAAAA CCCTGCAAAA AGAGATACCC CAGCGCCTGG ATGGCCCCGA CTTCAAGGCC
GAGAGCAAGC ACATCGAAAA GACCTACAAG GTCGAACAGG CCAAGGCCTA TGCCGAACTC
GACGCCTTTG CCGAGGCCCG CAGCTTTGCC CTGTACCGGG AGAATGGACA TTTGGTGTTC
ACCTTGCTGG GCGACAAAGG CACGGCGCTG ACCGAGAGCG AGGCGCGTTC GCTGCCGAAA
GAGCGACGGG CCCGGATTGA CCAGGCCGAG CAGGAATTGC GCGAGGAAAT CACCCGCTTT
CTGGACAAGA CCCGCCCGAT AGAGCGGGTC ATGAATGAAG GCCTGGCCGC CCTGCGGCGT
CAGGTCGCCC GCCCGCTGCT GGACCGCGAA GTGCAGGAAA TCCGTCTGGG CTTGAACAAG
CAGATCAAGG ACGCCATCAA GCTCTCTGAC TATCTGGAGC AGGTGATCAA GGATGTGCTG
GACAACCTGG AGCTGTTCCA GGTGTCGGAC GAGGATGATG AACTGCGCCA GGAAGAACTG
GTCGACGTTT TGTCCCGTTA CCGGGTGAAC CTGCTGGTGG ACAACGAAGG GCTGGTGGGT
GCGCCGGTGA TCATCGAGAA CAACCCCTCG TTTCGCTCCC TGTTTGGCAG CATCGAATAC
CAGCCCGACG AAGATGTGCT GGTGACCGAT TTCTCCCGCA TCCGCGCTGG CAGTCTGCTC
AAGGCGCATG GCGGTTTCAT GATGCTGCAT CTGCGCGACT TGTTGACCGA TGAATGGATG
TGGGAGAAGC TGCGGCGTTT CACGCGCAGC GGCCGTTTGC AGATCGAAGA ACCCGGCCCG
ATGCTCTCGC CGATGGCCGC CGTGTCACTG GAGCCCGAGG CGGTGGACGT GGAGGTCAAG
ATTGTGCTGA TTGGCTCGAC TGAGCAGTAC TACGAATTGC AGGAGGCCGA CCCGGAGTTT
GCACGCCGTT TTCGGGTCAA GGTGGATTTT GCCGAGAGCT TTCTGGCCAA TGCCCAGACC
TATGGCGCCT CAGCCGTGTT TGTGGCCCAC ACCGCGGCCC GCTTGGGCTT GCCCCATTTT
TCGGCCCCAG CGGTGGCGCG TCTGCTGGAG GATTCGCACC GTGAGGTGGA CGACCAGTTG
CGCCAGAGTG CCATCTTTGC CCGCACCGAG GCCCTGGTAA TGGAAAGCGC CACTGTCTGC
CGCACGCGCG CGGGCACGCG GGTTGAAGCC GTCGATGTTG AGGCTGCCTT GCAGGCGCGC
AAGCTGCGCC ATGACTACCC GGACCAGCGC CTGCAGGAAT CCATCACTGA GGGTGACTGG
CTGATCACCT TGCATGGCGA GAAAACCGGC CAGCTCAACG GCCTGTCGCA AATCGACCTG
GGCGATTACA GATTTGGCCT CCCGGTGCGG GTGACGGCGC GCACCTATGC CGGCAATGAG
GGTTTGCTCA ACATTGAGCG CGAGGTGGAA ATGTCCGGCC CCATCCACGA CAAAGGCGTG
CTGATACTGC ACAGCTACCT GTCGGCGCTG TTCGCCCACA TAGCGCCGCT GGCGCTGAAC
GCCTCCATCG TGTTTGAGCA GGAGTACCAC GGTATCGAGG GGGATTCGGC ATCTTGCGCC
GAGCTCTATG CGGTGCTGTC GTCGCTCTCT AGCCTGCCGC TCAAGCAGGG CATTGCCGTC
ACCGGTGCGG TCAACCAGCA CGGGGAAGTG TTGCCGGTGG GGGGCATCAA CGAGAAGATT
GAAGGTTACT TCCGGACCTG CCAAAAGGCC GGACTCGATG GCCAACAAGG GGTGCTGATT
CCGTGGCGCA ATCGGCGCCA CCTGATGCTG GAGCGCGAAC TGGTCGAGGC GGTGTCGCAG
GGCCTGTTTC ACATTTACAC CGCCGAACAT GCCAGCGAAG GCATTGAGCT GCTCACCGGC
TTCTCCTCAG GCATGCCCAT GGGCGCGAGC GGCTACGCGC AGGACAGTGT GCTGGGCCAT
GCCCAGAAAA CGCTGCAGGG CTACCGCCGG GCCTGCCAGT TGGCCGACCA TCCGAGGCTG
CCGCACGGGA AGTCACGCTG A
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| Protein sequence | MAISSLPPDV LRVTVAPESL GFSDTSELLQ LPLPWIGQER AEIAARFGLG MEQLDYNLFV
LGEVGSGRST LLRQVMQEVA AHRAAPPDLC YLHNFDAPDK PRALRLPPGQ GRLLRQFMAQ
MCKTLQKEIP QRLDGPDFKA ESKHIEKTYK VEQAKAYAEL DAFAEARSFA LYRENGHLVF
TLLGDKGTAL TESEARSLPK ERRARIDQAE QELREEITRF LDKTRPIERV MNEGLAALRR
QVARPLLDRE VQEIRLGLNK QIKDAIKLSD YLEQVIKDVL DNLELFQVSD EDDELRQEEL
VDVLSRYRVN LLVDNEGLVG APVIIENNPS FRSLFGSIEY QPDEDVLVTD FSRIRAGSLL
KAHGGFMMLH LRDLLTDEWM WEKLRRFTRS GRLQIEEPGP MLSPMAAVSL EPEAVDVEVK
IVLIGSTEQY YELQEADPEF ARRFRVKVDF AESFLANAQT YGASAVFVAH TAARLGLPHF
SAPAVARLLE DSHREVDDQL RQSAIFARTE ALVMESATVC RTRAGTRVEA VDVEAALQAR
KLRHDYPDQR LQESITEGDW LITLHGEKTG QLNGLSQIDL GDYRFGLPVR VTARTYAGNE
GLLNIEREVE MSGPIHDKGV LILHSYLSAL FAHIAPLALN ASIVFEQEYH GIEGDSASCA
ELYAVLSSLS SLPLKQGIAV TGAVNQHGEV LPVGGINEKI EGYFRTCQKA GLDGQQGVLI
PWRNRRHLML ERELVEAVSQ GLFHIYTAEH ASEGIELLTG FSSGMPMGAS GYAQDSVLGH
AQKTLQGYRR ACQLADHPRL PHGKSR
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