Gene Rfer_3305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3305 
Symbol 
ID3962890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp3668789 
End bp3669436 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content57% 
IMG OID637918125 
ProductDedA protein (DSG-1 protein) 
Protein accessionYP_524545 
Protein GI89902074 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.25714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCA TTACCTTTCT CTTTGACTTC ATTCTCCACG TTGACAAGTA CCTGGAGGCT 
TTTGTGCGCA GCTACGGCCT GTGGGTGTAT GCGCTGTTGT TTCTGGTGAT TTTTGTCGAG 
ACCGGTGTCG TCGTCATGCC CTTTCTGCCC GGCGACTCGC TCTTGTTTGT GGTGGGTGCC 
ATGTGCGGTG TCGGGCTGAT GAGTTACCCG CTGTCGGTGG GCCTGTTGCT GGCGGCGGCC 
GTGCTGGGCA ATCAGTCCAA CTATTCGCTG GGGCGCTACT TTGGGCCGCG GGTGTTCAAG 
TGGGAGGACT CCCGGCTGTT CAACAAAGCC GCCTTTGACC GGGCGCATGA TTTTTACGAG 
CGCTACGGTG GCATCACCCT CGTGGCAGCG CGCTTCATGC CCTTTGTGCG CACGTTTGCG 
CCTTTTGTGG CGGGTGTGGC GAAAATGACC CGCACCCGCT TCACCTTCTT TGATGTGACC 
GGCGGCACAC TCTGGGTCGT TGGCATCATC ACCGTCGGCT ATTTTTTCGG CAATATTGCG 
TTTGTGAAAG CGAATCTGGA CAAGATCATC TGGGCCATGA TTCTGATTCC CGGGCTGGTG 
ATCCTATTTG GCGCCTGGAA GTCGCGGCGC AAGGCAGTGC AAGCCTGA
 
Protein sequence
MEIITFLFDF ILHVDKYLEA FVRSYGLWVY ALLFLVIFVE TGVVVMPFLP GDSLLFVVGA 
MCGVGLMSYP LSVGLLLAAA VLGNQSNYSL GRYFGPRVFK WEDSRLFNKA AFDRAHDFYE 
RYGGITLVAA RFMPFVRTFA PFVAGVAKMT RTRFTFFDVT GGTLWVVGII TVGYFFGNIA 
FVKANLDKII WAMILIPGLV ILFGAWKSRR KAVQA