Gene Rfer_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3300 
Symbol 
ID3962885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3664051 
End bp3665022 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content64% 
IMG OID637918120 
Producthypothetical protein 
Protein accessionYP_524540 
Protein GI89902069 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.205377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTACA AATCACTCCT TCTCACCGCC CTCACCCTTC TCGCCACCGC CACGGCGCCG 
GTCGCGCAGG CCCAGAGCAA ACCCATTCGT CTGGTCGTGC CCTACGCCGC GGGCGGCCCG
CTGGACGTGA CAGCACGGAT ACTGGCCGAG GCCGTCAAGG ACAGCCTGGG CACCGTCATC
GTCGACAACA AGCCCGGTGC GGGCGGCAAC ATCGGCGCTG ACGCCGTCGC CAAAGCCGCC
CCCGACGGCC TGACCATCGG CATCGCCGCC ACCGCCACCC ACGCGGTGAA CCCCTGGCTT
TTTGCCAAGA TGCCTTTTAA CGCGGCCAGC GACTTTGCCC CCATTACCCA AATGGTGCGC
GTCCCCAATG TGTTGGTCAT GAACGCCGAC ACCGCCCGTC GCCTGAAAAT CAGCAGCGCC
CGCGACCTGA TTGCCTACGC CCGTGCCAAC CCGGCCAAAC TCAACTATGG CAGCGGCGGC
AACGGCAGCG CCGGTCATCT GGCCGGTGAA ATGTTCAAAA AAGAGGCCGG CATCTTTGCC
GTGCACATTC CCTACAACGG CGGCAACCCG GCGCAGTTGG CCCTGCTCAG TGGCCACGTT
GATTTCAATA TCGACAACCT CGCCACAGCG GCCCCCAACA TTCGCTCCGG CAAGCTCATT
GCACTGGCCG TGACCACGCC AACCCGCACT GCCGCCCTGC CCGACACGCC GCCGCTGGCC
GATACCCTCA AGGGTTTTTC CATTGACACC TGGTGGGGTC TGGTAGCACC TGCCGGCACG
CCCAAAGAGA CCATCACACG GCTCAATCAG GCTTTTGTCG CCGCGCTGAA CACACCCGCG
ACCAAATCCC GTTTTGCAAC CCTGCTGGCC GAACCCGCGC CCAGCACGCC GGAGGAATTT
GGCGCCTTGA TGCAAAAGGA ACGCGCCAAG TATGAAAAAC TGGTGAAGCT GTCAGGCGCC
CGGGTCGATT GA
 
Protein sequence
MHYKSLLLTA LTLLATATAP VAQAQSKPIR LVVPYAAGGP LDVTARILAE AVKDSLGTVI 
VDNKPGAGGN IGADAVAKAA PDGLTIGIAA TATHAVNPWL FAKMPFNAAS DFAPITQMVR
VPNVLVMNAD TARRLKISSA RDLIAYARAN PAKLNYGSGG NGSAGHLAGE MFKKEAGIFA
VHIPYNGGNP AQLALLSGHV DFNIDNLATA APNIRSGKLI ALAVTTPTRT AALPDTPPLA
DTLKGFSIDT WWGLVAPAGT PKETITRLNQ AFVAALNTPA TKSRFATLLA EPAPSTPEEF
GALMQKERAK YEKLVKLSGA RVD