| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3299 |
|---|
| Symbol | |
|---|
| ID | 3962884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 3662948 |
|---|
| End bp | 3664030 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637918119 |
|---|
| Product | CDP-6-deoxy-delta-3,4-glucoseen reductase |
|---|
| Protein accession | YP_524539 |
|---|
| Protein GI | 89902068 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
[COG0633] Ferredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.553886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCA GCGCAACCCG GGCTCCGGGC TTTCACATCA CGGTTCAACC CAGCGGCCGC
GCCTTCACCA CCGAGGCGGA CGAGACGATT TTGGCGGCCG GGATTCGCGC CGGTGTCGGC
CTGCCCTATG GCTGCCAGGA TGGCGCCTGC GGCTCCTGCA AATGCAAAAA GCTCGAAGGC
ATCGTGGTGC ATGGCGCGCA CCAGAGCAAG GCACTGAGCG ACGAGGAAGA GGCCCAGGGC
TGGGTCCTGA CCTGTTGCGC CGTGGCCCAC AGCGATGTGC TGCTGGAGTC GCGCCAGGTC
ACGCGGGAAG ACGCCTTGCC CATCAAGAAG ATGCCAAGCC GCGTCAGCGC CATGGAAAAG
CTGTCGCCGG ATGTGATGCG CCTGCAATTG CAGTTGCCCG CCAGCGAGCC GTTCAACTAC
CACGCCGGCC AGTATGTTGA ATTTCTGTTG CGCGATGGCG TGCGCCGCAG CTATTCCATC
GCCAACGCGC CGCACACGCC GGCAGCCCCC GACGGCAAGC CCGGCGCGCT GGAACTGCAC
ATTCGCCACA TGCCGGGCGG CCAATTTACC GACCATGTGT TTGCTGCCAT GAAAGAAAGA
GACATCCTGC GCATTGAGGG CCCGTATGGC AGCTTCTACC TGCGTGAAGA CAGCAGCAAA
CCGATCGTGC TGCTGGCTGC GGGCACCGGG TTTGCGCCCG TCAAGGCCTT GATAGAACAG
CTCCAGTTCA CGGGCAGCAC GCGCCCCGTG ACGCTGTACT GGGGCGGTCG GCGCCCGGCG
GACCTGTACC TGGACGCCTG GGTCAGAGCC AAACTGGCTG AAATGCCGAA CCTGCGCTAT
GTGCCGGTGG TGTCGAACGC GCTGCCCGAA GACAGCTGGT TGGGGCGCAC CGGTTTTGTC
CATCTGGCCG TGTTGCAGGA CCTGCCGGAC TTATCTGGCT ACCAGGTCTA TGCCAGTGGC
GCCCCCATCG TGGTGGACTC GGCCCACGCC GCCTACACGC GGGCGGGCCT GCCGCCGGAC
GAGTTTTATG CCGACGCGTT TATCACCGAG GCCGACAAGG CCCGGGACGG CGCAACCATC
TGA
|
|---|
| Protein sequence | MTRSATRAPG FHITVQPSGR AFTTEADETI LAAGIRAGVG LPYGCQDGAC GSCKCKKLEG
IVVHGAHQSK ALSDEEEAQG WVLTCCAVAH SDVLLESRQV TREDALPIKK MPSRVSAMEK
LSPDVMRLQL QLPASEPFNY HAGQYVEFLL RDGVRRSYSI ANAPHTPAAP DGKPGALELH
IRHMPGGQFT DHVFAAMKER DILRIEGPYG SFYLREDSSK PIVLLAAGTG FAPVKALIEQ
LQFTGSTRPV TLYWGGRRPA DLYLDAWVRA KLAEMPNLRY VPVVSNALPE DSWLGRTGFV
HLAVLQDLPD LSGYQVYASG APIVVDSAHA AYTRAGLPPD EFYADAFITE ADKARDGATI
|
|---|
| |