Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3276 |
Symbol | |
ID | 3962423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3636687 |
End bp | 3638702 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637918096 |
Product | NADH dehydrogenase (quinone) |
Protein accession | YP_524516 |
Protein GI | 89902045 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAGC TCATTGAGGC GGTTCTGGTT CTGATGGCGG GTGGTGCTTT GGCGCTGCTG CCGGCGCGCA ACATCGTGCG CGCCAGCGCC GGACTGGTGT CACAGATGAT TGCCCTGGTC CTGGTCGGGT CGGTCGCACT GCCGGTGCTG TTTGGCGGCC CGGATGTCAC GGGTGACATG CCCTGGGCCT ATCCCATCGG CACGCTGCAT TTCAGGCTGG ACGCGCTGGG CGCATTCTTT CTGAGCTGGT CCCTGCCCAT GACCCTGCTG GGCAGCGTGT ATGCGATGGG TTACCTGCGC AAGTACTTTG ACAGCCCACG TCACATCGGC GTGCACTTTG GCCTGCTCAA CATGATCTCG CTCTCGTTCA TTCTGGTGTA CGTCGGCGAG CATGCTGTCA CTTTTTTGCT GGGCTGGGAA ATCGCCGCCC TGTCGGCCTG GTTGCTGGTG ATCTGGGACT ACCCCAACCA GAAGGTGCGC TTTGCCGGCT TCAATTACCT GGTTTCCACC CATGTCGGCC TGATTTTCCT GGTGGCGGCG GTGATGATTC TCTACACCAA CACCCAGTCG TGGTTTCTGG ATGACTATGG CGACTGGATG AGCCAGAACC CCGGCACGGT GCGCAACACA GTCTTCTTGC TGCTGGTCAC CAGCTTTGGC CTGAAATCGG CATTTTTCCC GTTTCATTCC TGGCTGCCGC GCGCCCATGC GGCCGCGCCG GCGCATGTCT CGGCATTGAT GTCAGGCGTG ATTCACAAGG CCGGGCTGTA TGCACTGGTG CATTTTTTGA TGATCTCGGG CAAGCCGGAC GAGTGGATGG GCTGGTTCTT GATTGCGTTT TCCGTCACCT CGGCCGTGGT CGGTGGTCTC TATACCGTGG GCCAGCGCGA CCTGAAACGC TTGCTGGGCT ATTCGTCGAC CGAGAACGTC GGCATTGCCG GCATCGGCTT TGGCGTCGGC TGCCTGGGGC TGAGCTGGGA CATGCCCACG CTGGTGGCAC TTGGTTTTGG GGGCGGCTTG CTGCACGTGC TCAACCACGC TTTTTTCAAA TGCCAGTTGT TTTACGCCGC CGGCTGCGTG TACCAGATCA AGCATGTGAT CGACATCGAG CGCCTGGGCG GCCTGTTCAA GCTGATGCCG GTGACCGCCG TGTGTTTCAT CATCGGCGGC GTGGCGATTT CTGCCTTGCC GCCGTTCAAC GGCTTTGCCA GCGAGTTCCT GATCTATTCG GGCCTGTTCA CGGGTGAAAG CATCAATATC TGGGCCAAAC TCACGCTGGC CCTGACGGCC GCGGCGCTGG CCTTTGTCGG GGCCGTGTCG GCCCTGAGCA TCACGCGCGC CTTTGGCGTG ATTTTTTTGG GCAACGCGCG CGATGCCAGC CTGCCTGAAG CGCACGAAGC CAGTGGCTGG ATGCTGTTTC CCATGGTGCT CCATACCATC GGCACGGTGG TCCTGGGCGT GGCCCCCACC TTGGGCTTTG CCATGGTAGC GGCGCCCACA GCCCTGTTCC TGCATTTGAC GCCCGACGCC GTGGCCCTTG ATACCCTGCA GTCTGTCACC GGCACGCTGC TGCGCATCGG CGCCATCTCG GCCGGATTGG TGGCCGTGCT GGTCGTGGTG CTGGCGCTGG TGGGGTTGCG CGCACGCCTC AAACGACAGA CACCAAACCG CAACGCCACC TGGGGTTGCG GCTATGGCGC GCCCAATGCG CGCATGCAGT ACACAGGTGG TAGTTTTTCG GCCGACTTTG CCGGCCGATT CAAAAACATC ATGCTGATGC TCCAGCGGAA AAAAGCACCC GCCGGGTATT TCCCCCGTGA CAGCTACGTG ATCACTGACT GTGTGGATGC GGTCGAGCGG CGCCTGTTTG CGGTGATCAG CCACGGCGAT GAATCGGCCA GCGACTTATC GCAAAAACTG CATGAAGACG ACCCGCGACT CGCCTTTTCA GCCGGTCTGG CTGCCATCGT GGCCATCGGC GCGCTGGTGT TGCTGGCCGA GGGGGGCTTG CCTTGA
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Protein sequence | MNQLIEAVLV LMAGGALALL PARNIVRASA GLVSQMIALV LVGSVALPVL FGGPDVTGDM PWAYPIGTLH FRLDALGAFF LSWSLPMTLL GSVYAMGYLR KYFDSPRHIG VHFGLLNMIS LSFILVYVGE HAVTFLLGWE IAALSAWLLV IWDYPNQKVR FAGFNYLVST HVGLIFLVAA VMILYTNTQS WFLDDYGDWM SQNPGTVRNT VFLLLVTSFG LKSAFFPFHS WLPRAHAAAP AHVSALMSGV IHKAGLYALV HFLMISGKPD EWMGWFLIAF SVTSAVVGGL YTVGQRDLKR LLGYSSTENV GIAGIGFGVG CLGLSWDMPT LVALGFGGGL LHVLNHAFFK CQLFYAAGCV YQIKHVIDIE RLGGLFKLMP VTAVCFIIGG VAISALPPFN GFASEFLIYS GLFTGESINI WAKLTLALTA AALAFVGAVS ALSITRAFGV IFLGNARDAS LPEAHEASGW MLFPMVLHTI GTVVLGVAPT LGFAMVAAPT ALFLHLTPDA VALDTLQSVT GTLLRIGAIS AGLVAVLVVV LALVGLRARL KRQTPNRNAT WGCGYGAPNA RMQYTGGSFS ADFAGRFKNI MLMLQRKKAP AGYFPRDSYV ITDCVDAVER RLFAVISHGD ESASDLSQKL HEDDPRLAFS AGLAAIVAIG ALVLLAEGGL P
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