| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3246 |
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| Symbol | |
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| ID | 3960593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3598087 |
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| End bp | 3599109 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637918066 |
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| Product | ABC transporter periplasmic-binding protein |
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| Protein accession | YP_524486 |
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| Protein GI | 89902015 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.791239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGTC GTCTTTTCAC GCTGGCCGCC ACCGCGCTGG CTGCGTTCTC GCTGTCAACC
CAAGCCCGTG CGGCCGATGA ACTGCGCGTG ATGGTGCACA GTTCTTTTTC ACTGCCCAAG
CCCCTGCTGG CGCAGTTTGA AGCGCAAAAC GGCATCCGGC TGGCCATCAT CAAGGGCGGT
GACGCGGGTG AAATGCTCAA CAAGTTGATT TTGACCCGTG CCCAACCCAT CGCCGATGTG
GTGTTTGGCA TTGACAACAC GCTGGTGGGC AAGGCGCTGG CCGCTGGTGT GCTGGAGCCT
GCGCTGCCCC AGACCGCCGA AGCGCCCGAT GCCAATCTGG GGGCTGCGCT GGCGGCGGTG
GACTATGGCT TCGTGACCTT GAATTACGAC AAAGCGGCTG TGGCCAAACG CGGCATCAGT
TTGCCGAAAA CCTTGCAGGA TTTGACGCTG CCCGCCTACA AGAACTGGTT GGTCACACCC
AACCCCGCCA CCAGCAGCAC CGGCTACGCC TTCATGTTGG CCACCATTTC CGCCATGGGC
GAAGAGCCCG CCTTTGCCTG GTGGGCGCAG ATGCGCGGCA ACGGCCTCAA GGTGGTCAAG
GGCTGGAGCG AAGCTTATTA CACCGACTTT GCGCGTAACA AGGGTGCCTA CCCGCTGGTG
GTGAGTTACG CCACCAGTCC GGCCGCCGAG GTGTTTTACA GCAAGGAAAA AACGCCAGAG
TCGCCCACGG CGAGCCTGAA CCTCAAGGGC GGCGTTTTCC GCCAGGTGGA AGGTGTGGGC
CTGGTCAAAG GGGGTGGCCA GCGGGCGACG GCTTTGAAGT TTGTCGATTT TCTGCGTTCT
GCCCCCGTGC AAGAGGCCCT GCAAACGGCG ATGTGGATGT ACCCGGTGCA GGCCAAAACC
CCGCTTGCGG AGGTGATGCG CCACGCCGCC GAGCCGACCG AGTTTGAAGC CCCGGCGACC
CAAGTGGTAG CCGGCAAGGG TGCGCAGTGG GTCGCACGCT GGACCAAAGT GGTGCTCAAG
TAG
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| Protein sequence | MNRRLFTLAA TALAAFSLST QARAADELRV MVHSSFSLPK PLLAQFEAQN GIRLAIIKGG
DAGEMLNKLI LTRAQPIADV VFGIDNTLVG KALAAGVLEP ALPQTAEAPD ANLGAALAAV
DYGFVTLNYD KAAVAKRGIS LPKTLQDLTL PAYKNWLVTP NPATSSTGYA FMLATISAMG
EEPAFAWWAQ MRGNGLKVVK GWSEAYYTDF ARNKGAYPLV VSYATSPAAE VFYSKEKTPE
SPTASLNLKG GVFRQVEGVG LVKGGGQRAT ALKFVDFLRS APVQEALQTA MWMYPVQAKT
PLAEVMRHAA EPTEFEAPAT QVVAGKGAQW VARWTKVVLK
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