Gene Rfer_3239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3239 
Symbol 
ID3960585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp3589408 
End bp3590076 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content59% 
IMG OID637918058 
Productpeptidase M50 
Protein accessionYP_524479 
Protein GI89902008 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.345488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTG CCAACCTGAT TCAGACCGTT GCCCTGTACG CGCTGCCGGT GCTGTTCGCC 
ATTACGGTGC ACGAGGCTGC GCACGGCTAC GTGGCCCGCC ATTTTGGTGA CAACACGGCC 
TACATGCTGG GGCGCGTCAC GCTCAACCCG CTCAAACACA TCGACCCCGT GGGCACCATT 
TTGATGCCGC TGCTGCTGTA CTTTGCCACC TCGGGTGCCT TCCTGTTTGG CTATGCCAAA 
CCGGTGCCGG TCCGCTTTGA CAAGCTGCGC GACCCTAAAC GCCACATGAT CTGGGTGGCG 
CTGGCCGGGC CGGGCGTCAA TTTCATTCAA GCCTTTCTGT GGGGCGCGCT GTTCTATGTG 
CTCAAAGGCA CGGGTGTGAC CGAGCCCTTT TTTATCAAGA TGGCACAAGG CGGCATTCTG 
GTCAATCTGG TGATGTTTGC CTTCAACCTG TTCCCGCTGC CGCCGCTGGA CGGCGGGCGT 
ATTCTGGTCG GCTTGCTGCC CTACCGCCAG GCCGAACTGG TCTCGCGGGT GGAGCCCTGG 
GGCTTTTTCA TCGTGATGGC GCTGGTGATT TCAGGCATCG TCAGCACGCT GTGGCTGCAA 
CCCTTGATGA CGCTGAGCTA CTTTGTGCTC GACATCTTGC TCAGCCCTCT TGCCATGATT 
TTTGGCTAG
 
Protein sequence
MDIANLIQTV ALYALPVLFA ITVHEAAHGY VARHFGDNTA YMLGRVTLNP LKHIDPVGTI 
LMPLLLYFAT SGAFLFGYAK PVPVRFDKLR DPKRHMIWVA LAGPGVNFIQ AFLWGALFYV 
LKGTGVTEPF FIKMAQGGIL VNLVMFAFNL FPLPPLDGGR ILVGLLPYRQ AELVSRVEPW 
GFFIVMALVI SGIVSTLWLQ PLMTLSYFVL DILLSPLAMI FG