| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3234 |
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| Symbol | |
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| ID | 3962874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3582403 |
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| End bp | 3584133 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637918053 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_524474 |
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| Protein GI | 89902003 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.224513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAT TAGTGCGTGA GATTCCGCCC CGTTCTGCCT GGGCGCTGGA ACAAGCCGGC
ATCCACCCGC TGCTGGCCCA ACTTTATGCA GCACGCGGCG TACAAAGCGT GCAGGAGCTC
GACGACGGCC TGACGCGCCT GATTGCGCCC ACTGAGATGC TGGGCTTGAG CGCGGCGGCC
ACGCTGCTGG CCGACGCGAT TGCGGCGGAC CAGACACTCT GCATCGTGGC CGACTACGAC
TGCGACGGCG CCACCGCCTG CGCGGTGGGC ATTCGCGGCT TGCGCCTGCT GGGGGCGAAA
CACGTCAGCT ACATCGTCCC CGACCGCGTG GTCGATGGCT ACGGCCTGAC CTCACCAATT
TCAGAGCGCG TCAAGGCCAG CGGCGCTGAC GTGCTGATCA CGGTGGACAA CGGCATCGCC
AGTTTTGAGG GCGTCGCCAC CGCACGGGCC TTGGGCTTGC AGGTGCTGGT AACGGATCAC
CACTTGCCCG CCAGCCGGGA CGGCCAGATC GTGCTGCCCG AAGCGGACGT GATCGTGAAT
CCGAACCAGC CCGGCTGCAC CTTTGCCAGC AAGTCGATCG CCGGTGTGGG CGTGATGTTT
TACGTGTTGC TGGCACTGCG CGCCGAGCTG CGCCAGCGTG GCGTGTTCCA TGCGGCCACG
CAACCGAAGC TCGATGCCTT GCTGCCGCTG GTGGCGCTGG GCACGGTGGC CGACGTGGTC
AAGCTCGACG CGAACAACCG CCGCCTCGTG GCCCAAGGCT TAAAACGGGT TCGCGCCCTG
ATGCTTCCTA CCGGTTTAGC TAGTCTTTTT GTAGCAGCTG GGCGCGACGC CCAGGTCGCC
ACCACGTTTG ACTTTGGCTT TGCCTTGGGG CCGCGCATCA ACGCCGCCGG GCGTTTGTCC
GACATGACCC TGGGCATTGA ATGCCTGCTG ACTGACGATG CAGCGCGTGG CCTGGAGCTG
GCGAAAGCAC TCGACGGCAT CAACCGCGAG CGGCGCGAGA TTGAAGGCAG CATGCGCGAA
CAGGCTTTGG CCGTGGCCGA ATCCTTGTTT GACGACAACG AGGAGGCGCC GCCAGCCATC
TGCGTGTTCG ACCCCGACTT TCACGAGGGT GTGGTCGGCA TCGTGGCCTC GCGCATCAAG
GACAAGCTGC ACCGGCCGAC CTTTGTTTTT GCGCAAAGCA AAGCGCCGGG GCGCGAGCAT
GAGCTCAAGG GCTCGGGCCG GTCCATCCCC GGCTTTCACC TGCGTGACGC ACTCGACCTG
GTGGCCAAAC GCCACCCCGG CGTGCTGCTG CGTTTTGGCG GCCACGCCAT GGCGGCCGGT
TGCACCATTG CCGTGGAGGA CTTCGATGCC TTCGAGCAGA GCCTGAGCCA GGTCGCGCGG
GAATGGCTCG ATGCCGCCAC GTTGATGCGC CGCCTCGATA CCGACGGCCC CTTGAAACCC
GAGTACCGCC GGGTCGAACT GGTGGACGCG CTGCACAAGG AAGTCTGGGG TCAGGGTTTT
GCGCCGCCCA CCTTCAGCGA AGAAGTCGAA GTGCTGTCGC AGCGTCTGGT GGGTGAAAAA
CACCTGGCAC TCAAGCTCAA GCACCAGGGC CAGCCGGTGG ACGGCATCTG GTTTGGCCAC
ACCGAGCCGT TGCCCGCGCG CGTCAAACTC GCGTTCCGGC TGGATGCCGA TGCCTGGAAC
GGCGTTCGCC GGGTGCGGTT TTTGGTGGAG GCGGCTCAGG CGGAGCTTTG A
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| Protein sequence | MKILVREIPP RSAWALEQAG IHPLLAQLYA ARGVQSVQEL DDGLTRLIAP TEMLGLSAAA
TLLADAIAAD QTLCIVADYD CDGATACAVG IRGLRLLGAK HVSYIVPDRV VDGYGLTSPI
SERVKASGAD VLITVDNGIA SFEGVATARA LGLQVLVTDH HLPASRDGQI VLPEADVIVN
PNQPGCTFAS KSIAGVGVMF YVLLALRAEL RQRGVFHAAT QPKLDALLPL VALGTVADVV
KLDANNRRLV AQGLKRVRAL MLPTGLASLF VAAGRDAQVA TTFDFGFALG PRINAAGRLS
DMTLGIECLL TDDAARGLEL AKALDGINRE RREIEGSMRE QALAVAESLF DDNEEAPPAI
CVFDPDFHEG VVGIVASRIK DKLHRPTFVF AQSKAPGREH ELKGSGRSIP GFHLRDALDL
VAKRHPGVLL RFGGHAMAAG CTIAVEDFDA FEQSLSQVAR EWLDAATLMR RLDTDGPLKP
EYRRVELVDA LHKEVWGQGF APPTFSEEVE VLSQRLVGEK HLALKLKHQG QPVDGIWFGH
TEPLPARVKL AFRLDADAWN GVRRVRFLVE AAQAEL
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