Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3196 |
Symbol | |
ID | 3963066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3536350 |
End bp | 3537384 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637918015 |
Product | ApbE-like lipoprotein |
Protein accession | YP_524436 |
Protein GI | 89901965 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.764413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTCTC CTGCGTCTGA TCGCATTCAA CACGGGCGGC GTCAGCTTGC ATTGGCCTTG CCACTGTTGG CGTGTGGCCT GGTGGTGCCG TCGGTGCACG CCAAGGCGGA TGTTCAGCAG TCCTCGCAAA TTCTGATGGG CACGCGGGTC GACCTGACGC TGCAGGGCAA TGACAGTGCA GCCCTGGCCG CTGCCGCAAC TGCAGCGTTC ACCGAGATGA ACCGGTTGGC CGACATGATG AGCCGCTACC GTGTGACGAG CGCACTGAAC GCCATCAACC TGATGGCGGG TCTGCAACCG GTGCCAGTAC CGCCGGAGTT GCTGCGCGTG CTGTTGATGG CGCGTCAGGC GGGACAGGCC AGTGGCGGGG CTTTTGATGC CACGGTCGGG TCTTTGCGGG ACTGGGATTT CAGCCCCGAG CATCCGTCCA TCCCCTCAAA GCAGCAGATC GCAGCGCAAT TGCGGCTGGT CGATCAAAAA GCCGGTCTGG TGATCAGTGA ACATGCGGGC ACGGCCTATC TGACCCAAAG AGGCATGCTG CTGGATCTGG GCGGCATTGC CAAACTGCCC ATTCTTCAGG CTGGCCTGGG GCAACTTCAA AGCCGTGGCG TCACCAACGC GATGATCAAC GGCGGTGGCG ACGTGCTGGT GATGGGCCGT TTGAATGGCC GCCCCTGGCG CGTGGGCCTG CGCGACCCGC GTCAACCCAG CCAATTATTG GGTGTGGTGT CCTTGACCCA GGGTTTTGTC GCGGCCTCCG GCGATTACGA ACGTTTCATG ATGCACGACG GCAAGCGCTT GCATCACATC CTTGATCCCA AAACCGGCTA CCCCAGTACC GGTCCCCATG GGGTTACCTT GATCAGTGAG CAACTCGAAC TCATCAACGG TCTGGGCGCG GCCCTGATGG TGGCGGGTGC CGATGCCGGG CGAACCCGGG TCGGCCGCAC ACCGGGAATC GATGCCTTGA TCGTTGATGC CGACAGCAGC CTCTGGCTGT CGCCCGGTAT GGCGCAGCGG TTCAAGCGCA GCTGA
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Protein sequence | MASPASDRIQ HGRRQLALAL PLLACGLVVP SVHAKADVQQ SSQILMGTRV DLTLQGNDSA ALAAAATAAF TEMNRLADMM SRYRVTSALN AINLMAGLQP VPVPPELLRV LLMARQAGQA SGGAFDATVG SLRDWDFSPE HPSIPSKQQI AAQLRLVDQK AGLVISEHAG TAYLTQRGML LDLGGIAKLP ILQAGLGQLQ SRGVTNAMIN GGGDVLVMGR LNGRPWRVGL RDPRQPSQLL GVVSLTQGFV AASGDYERFM MHDGKRLHHI LDPKTGYPST GPHGVTLISE QLELINGLGA ALMVAGADAG RTRVGRTPGI DALIVDADSS LWLSPGMAQR FKRS
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